Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 NHP2YDL208W 471 nt2.05□□□□□ -2.08
SWP82P43554 YDR413CYDR413C 576 nt2.05□□□□□ -2.08
SWP82P43554 YNL277W-AYNL277W-A 189 nt2.05□□□□□ -2.08
SWP82P43554 PET309YLR067C 2898 nt2.05□□□□□ -2.08
SWP82P43554 SGO1YOR073W 1773 nt2.05□□□□□ -2.08
SWP82P43554 YFR016CYFR016C 3702 nt2.05□□□□□ -2.08
SWP82P43554 RTT101YJL047C 2529 nt2.05□□□□□ -2.08
SWP82P43554 YDR341CYDR341C 1824 nt2.04□□□□□ -2.08
SWP82P43554 VPS34YLR240W 2628 nt2.04□□□□□ -2.08
SWP82P43554 PAC1YOR269W 1485 nt2.04□□□□□ -2.08
SWP82P43554 RKM1YPL208W 1752 nt2.04□□□□□ -2.08
SWP82P43554 PDR3YBL005W 2931 nt2.04□□□□□ -2.08
SWP82P43554 EFR3YMR212C 2349 nt2.03□□□□□ -2.08
SWP82P43554 DNA2YHR164C 4569 nt2.03□□□□□ -2.08
SWP82P43554 YDR008CYDR008C 351 nt2.03□□□□□ -2.08
SWP82P43554 tC(GCA)BtC(GCA)B 72 nt2.03□□□□□ -2.08
SWP82P43554 tC(GCA)GtC(GCA)G 72 nt2.03□□□□□ -2.08
SWP82P43554 tC(GCA)P1tC(GCA)P1 72 nt2.03□□□□□ -2.08
SWP82P43554 tC(GCA)P2tC(GCA)P2 72 nt2.03□□□□□ -2.08
SWP82P43554 PRE4YFR050C 801 nt2.03□□□□□ -2.08
SWP82P43554 MAM33YIL070C 801 nt2.03□□□□□ -2.08
SWP82P43554 YKR075W-AYKR075W-A 270 nt2.03□□□□□ -2.08
SWP82P43554 YLR053CYLR053C 327 nt2.03□□□□□ -2.08
SWP82P43554 YLR146W-AYLR146W-A 189 nt2.03□□□□□ -2.08
SWP82P43554 YMR031W-AYMR031W-A 327 nt2.03□□□□□ -2.08
SWP82P43554 YNL114CYNL114C 372 nt2.03□□□□□ -2.08
SWP82P43554 snR36snR36 182 nt2.03□□□□□ -2.08
SWP82P43554 SWI6YLR182W 2412 nt2.03□□□□□ -2.08
SWP82P43554 BRE1YDL074C 2103 nt2.03□□□□□ -2.08
SWP82P43554 NAM7YMR080C 2916 nt2.03□□□□□ -2.08
SWP82P43554 RPH1YER169W 2391 nt2.02□□□□□ -2.09
SWP82P43554 ELG1YOR144C 2376 nt2.02□□□□□ -2.09
SWP82P43554 snR70snR70 164 nt2.02□□□□□ -2.09
SWP82P43554 YDL118WYDL118W 381 nt2.02□□□□□ -2.09
SWP82P43554 YHL041WYHL041W 450 nt2.02□□□□□ -2.09
SWP82P43554 CYB5YNL111C 363 nt2.02□□□□□ -2.09
SWP82P43554 GCN2YDR283C 4980 nt2.02□□□□□ -2.09
SWP82P43554 TOR2YKL203C 7425 nt2.02□□□□□ -2.09
SWP82P43554 TFC8YPL007C 1767 nt2.02□□□□□ -2.09
SWP82P43554 COS111YBR203W 2775 nt2.02□□□□□ -2.09
SWP82P43554 YPR097WYPR097W 3222 nt2.01□□□□□ -2.09
SWP82P43554 BRP1YGL007W 378 nt2.01□□□□□ -2.09
SWP82P43554 YHR071C-AYHR071C-A 321 nt2.01□□□□□ -2.09
SWP82P43554 RTT107YHR154W 3213 nt2.01□□□□□ -2.09
SWP82P43554 JIP5YPR169W 1479 nt2.01□□□□□ -2.09
SWP82P43554 SYH1YPL105C 2550 nt2.01□□□□□ -2.09
SWP82P43554 VPS8YAL002W 3825 nt2□□□□□ -2.09
SWP82P43554 YER097WYER097W 330 nt2□□□□□ -2.09
SWP82P43554 YFL032WYFL032W 321 nt2□□□□□ -2.09
SWP82P43554 SWI5YDR146C 2130 nt2□□□□□ -2.09
SWP82P43554 IST2YBR086C 2841 nt1.99□□□□□ -2.09
SWP82P43554 SAP190YKR028W 3102 nt1.99□□□□□ -2.09
SWP82P43554 RPL37BYDR500C 267 nt1.99□□□□□ -2.09
SWP82P43554 RPL39YJL189W 156 nt1.99□□□□□ -2.09
SWP82P43554 YML099W-AYML099W-A 330 nt1.99□□□□□ -2.09
SWP82P43554 SAR1YPL218W 573 nt1.99□□□□□ -2.09
SWP82P43554 RPL36BYPL249C-A 303 nt1.99□□□□□ -2.09
SWP82P43554 SCP160YJL080C 3669 nt1.99□□□□□ -2.09
SWP82P43554 CHC1YGL206C 4962 nt1.98□□□□□ -2.09
SWP82P43554 IRR1YIL026C 3453 nt1.98□□□□□ -2.09
SWP82P43554 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
SWP82P43554 YHR007C-AYHR007C-A 216 nt1.98□□□□□ -2.09
SWP82P43554 FMP23YBR047W 528 nt1.98□□□□□ -2.09
SWP82P43554 CSN9YDR179C 489 nt1.97□□□□□ -2.09
SWP82P43554 TMA10YLR327C 261 nt1.97□□□□□ -2.09
SWP82P43554 YMR193C-AYMR193C-A 387 nt1.97□□□□□ -2.09
SWP82P43554 snR43snR43 209 nt1.97□□□□□ -2.09
SWP82P43554 FKS1YLR342W 5631 nt1.97□□□□□ -2.09
SWP82P43554 RIM20YOR275C 1986 nt1.97□□□□□ -2.09
SWP82P43554 UBP1YDL122W 2430 nt1.97□□□□□ -2.09
SWP82P43554 UTP22YGR090W 3714 nt1.96□□□□□ -2.09
SWP82P43554 HER1YOR227W 3741 nt1.96□□□□□ -2.09
SWP82P43554 OSH6YKR003W 1347 nt1.96□□□□□ -2.1
SWP82P43554 HDA3YPR179C 1968 nt1.96□□□□□ -2.1
SWP82P43554 PXA2YKL188C 2562 nt1.96□□□□□ -2.1
SWP82P43554 RPL35AYDL191W 363 nt1.96□□□□□ -2.1
SWP82P43554 YDR183C-AYDR183C-A 258 nt1.96□□□□□ -2.1
SWP82P43554 GCN4YEL009C 846 nt1.96□□□□□ -2.1
SWP82P43554 EMP24YGL200C 612 nt1.96□□□□□ -2.1
SWP82P43554 HTB2YBL002W 396 nt1.96□□□□□ -2.1
SWP82P43554 RGA1YOR127W 3024 nt1.96□□□□□ -2.1
SWP82P43554 KOG1YHR186C 4674 nt1.96□□□□□ -2.1
SWP82P43554 NOP53YPL146C 1368 nt1.96□□□□□ -2.1
SWP82P43554 SSQ1YLR369W 1974 nt1.96□□□□□ -2.1
SWP82P43554 DCP2YNL118C 2913 nt1.95□□□□□ -2.1
SWP82P43554 PLC1YPL268W 2610 nt1.95□□□□□ -2.1
SWP82P43554 YIL115W-AYIL115W-A 372 nt1.95□□□□□ -2.1
SWP82P43554 TAR1YLR154W-C 375 nt1.95□□□□□ -2.1
SWP82P43554 YBL012CYBL012C 402 nt1.95□□□□□ -2.1
SWP82P43554 NUT2YPR168W 474 nt1.95□□□□□ -2.1
SWP82P43554 APL5YPL195W 2799 nt1.95□□□□□ -2.1
SWP82P43554 HCS1YKL017C 2052 nt1.95□□□□□ -2.1
SWP82P43554 SLY1YDR189W 2001 nt1.95□□□□□ -2.1
SWP82P43554 YCR087C-AYCR087C-A 462 nt1.94□□□□□ -2.1
SWP82P43554 CYC7YEL039C 342 nt1.94□□□□□ -2.1
SWP82P43554 YER181CYER181C 324 nt1.94□□□□□ -2.1
SWP82P43554 UPS1YLR193C 528 nt1.94□□□□□ -2.1
SWP82P43554 RPL38YLR325C 237 nt1.94□□□□□ -2.1
SWP82P43554 YOP1YPR028W 543 nt1.94□□□□□ -2.1
SWP82P43554 CAT2YML042W 2013 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms