Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 IES5YER092W 378 nt0.2□□□□□ -2.38
RPB11P38902 RPL29YFR032C-A 180 nt0.19□□□□□ -2.38
RPB11P38902 KAR3YPR141C 2190 nt0.19□□□□□ -2.38
RPB11P38902 MKT1YNL085W 2493 nt0.18□□□□□ -2.38
RPB11P38902 EDC1YGL222C 528 nt0.18□□□□□ -2.38
RPB11P38902 PDE2YOR360C 1581 nt0.18□□□□□ -2.38
RPB11P38902 SRP14YDL092W 441 nt0.17□□□□□ -2.38
RPB11P38902 RUF22RUF22 515 nt0.17□□□□□ -2.38
RPB11P38902 HDA3YPR179C 1968 nt0.16□□□□□ -2.38
RPB11P38902 ZIP1YDR285W 2628 nt0.16□□□□□ -2.38
RPB11P38902 RSM18YER050C 417 nt0.16□□□□□ -2.38
RPB11P38902 YPR147CYPR147C 915 nt0.16□□□□□ -2.38
RPB11P38902 YPR170CYPR170C 336 nt0.16□□□□□ -2.38
RPB11P38902 YPR172WYPR172W 603 nt0.16□□□□□ -2.38
RPB11P38902 YSP1YHR155W 3687 nt0.16□□□□□ -2.38
RPB11P38902 VPS52YDR484W 1926 nt0.16□□□□□ -2.38
RPB11P38902 THG1YGR024C 714 nt0.15□□□□□ -2.39
RPB11P38902 YHL002C-AYHL002C-A 489 nt0.15□□□□□ -2.39
RPB11P38902 IMP3YHR148W 552 nt0.15□□□□□ -2.39
RPB11P38902 NUP82YJL061W 2142 nt0.15□□□□□ -2.39
RPB11P38902 YBL068W-AYBL068W-A 237 nt0.15□□□□□ -2.39
RPB11P38902 VPS74YDR372C 1038 nt0.14□□□□□ -2.39
RPB11P38902 PAU12YGR294W 363 nt0.14□□□□□ -2.39
RPB11P38902 UBX4YMR067C 1251 nt0.14□□□□□ -2.39
RPB11P38902 SPR2YOR214C 711 nt0.14□□□□□ -2.39
RPB11P38902 SLD3YGL113W 2007 nt0.13□□□□□ -2.39
RPB11P38902 YGL042CYGL042C 306 nt0.13□□□□□ -2.39
RPB11P38902 GSP1YLR293C 660 nt0.13□□□□□ -2.39
RPB11P38902 PAI3YMR174C 207 nt0.13□□□□□ -2.39
RPB11P38902 YOP1YPR028W 543 nt0.13□□□□□ -2.39
RPB11P38902 BEM3YPL115C 3387 nt0.13□□□□□ -2.39
RPB11P38902 PPN1YDR452W 2025 nt0.13□□□□□ -2.39
RPB11P38902 SCW11YGL028C 1629 nt0.13□□□□□ -2.39
RPB11P38902 YDL068WYDL068W 330 nt0.12□□□□□ -2.39
RPB11P38902 YDR003W-AYDR003W-A 123 nt0.12□□□□□ -2.39
RPB11P38902 NTF2YER009W 378 nt0.12□□□□□ -2.39
RPB11P38902 PRE4YFR050C 801 nt0.12□□□□□ -2.39
RPB11P38902 RPS7BYNL096C 573 nt0.12□□□□□ -2.39
RPB11P38902 YOR029WYOR029W 336 nt0.12□□□□□ -2.39
RPB11P38902 IRC13YOR235W 315 nt0.12□□□□□ -2.39
RPB11P38902 ULP2YIL031W 3105 nt0.11□□□□□ -2.39
RPB11P38902 TRS65YGR166W 1683 nt0.11□□□□□ -2.39
RPB11P38902 RPS24BYIL069C 408 nt0.11□□□□□ -2.39
RPB11P38902 SDH2YLL041C 801 nt0.11□□□□□ -2.39
RPB11P38902 SPC24YMR117C 642 nt0.11□□□□□ -2.39
RPB11P38902 NUP120YKL057C 3114 nt0.11□□□□□ -2.39
RPB11P38902 AI5_ALPHAQ0070 1893 nt0.1□□□□□ -2.39
RPB11P38902 YEL030C-AYEL030C-A 315 nt0.1□□□□□ -2.39
RPB11P38902 ISD11YER048W-A 285 nt0.1□□□□□ -2.39
RPB11P38902 TAD1YGL243W 1203 nt0.1□□□□□ -2.39
RPB11P38902 YIL134C-AYIL134C-A 204 nt0.1□□□□□ -2.39
RPB11P38902 YJL086CYJL086C 369 nt0.1□□□□□ -2.39
RPB11P38902 WAR1YML076C 2835 nt0.1□□□□□ -2.39
RPB11P38902 BFR2YDR299W 1605 nt0.09□□□□□ -2.39
RPB11P38902 SBH1YER087C-B 249 nt0.09□□□□□ -2.4
RPB11P38902 HTD2YHR067W 843 nt0.09□□□□□ -2.4
RPB11P38902 TIM8YJR135W-A 264 nt0.09□□□□□ -2.4
RPB11P38902 YJR003CYJR003C 1560 nt0.09□□□□□ -2.4
RPB11P38902 MMS4YBR098W 2076 nt0.09□□□□□ -2.4
RPB11P38902 SLI15YBR156C 2097 nt0.09□□□□□ -2.4
RPB11P38902 HIT1YJR055W 495 nt0.08□□□□□ -2.4
RPB11P38902 SWI5YDR146C 2130 nt0.08□□□□□ -2.4
RPB11P38902 KAR1YNL188W 1302 nt0.08□□□□□ -2.4
RPB11P38902 CHS6YJL099W 2241 nt0.07□□□□□ -2.4
RPB11P38902 YNL054W-BYNL054W-B 5250 nt0.07□□□□□ -2.4
RPB11P38902 YGR290WYGR290W 444 nt0.07□□□□□ -2.4
RPB11P38902 RPS30BYOR182C 192 nt0.07□□□□□ -2.4
RPB11P38902 YCK3YER123W 1575 nt0.06□□□□□ -2.4
RPB11P38902 UTP20YBL004W 7482 nt0.06□□□□□ -2.4
RPB11P38902 YGL204CYGL204C 306 nt0.06□□□□□ -2.4
RPB11P38902 YHR028W-AYHR028W-A 321 nt0.06□□□□□ -2.4
RPB11P38902 VPS63YLR261C 327 nt0.06□□□□□ -2.4
RPB11P38902 YOL013W-AYOL013W-A 192 nt0.06□□□□□ -2.4
RPB11P38902 ALY2YJL084C 3141 nt0.06□□□□□ -2.4
RPB11P38902 RPL26BYGR034W 384 nt0.05□□□□□ -2.4
RPB11P38902 YKL145W-AYKL145W-A 93 nt0.05□□□□□ -2.4
RPB11P38902 YLR163W-AYLR163W-A 114 nt0.05□□□□□ -2.4
RPB11P38902 YOR020W-AYOR020W-A 273 nt0.05□□□□□ -2.4
RPB11P38902 YPR153WYPR153W 423 nt0.05□□□□□ -2.4
RPB11P38902 GEA2YEL022W 4380 nt0.04□□□□□ -2.4
RPB11P38902 RPL37AYLR185W 267 nt0.04□□□□□ -2.4
RPB11P38902 YOR366WYOR366W 354 nt0.04□□□□□ -2.4
RPB11P38902 NPR2YEL062W 1848 nt0.03□□□□□ -2.4
RPB11P38902 SLY1YDR189W 2001 nt0.03□□□□□ -2.4
RPB11P38902 PSF2YJL072C 642 nt0.03□□□□□ -2.4
RPB11P38902 ARV1YLR242C 966 nt0.03□□□□□ -2.4
RPB11P38902 LCD1YDR499W 2244 nt0.03□□□□□ -2.4
RPB11P38902 AFR1YDR085C 1863 nt0.02□□□□□ -2.41
RPB11P38902 HNT1YDL125C 477 nt0.02□□□□□ -2.41
RPB11P38902 ATC1YDR184C 885 nt0.02□□□□□ -2.41
RPB11P38902 YHR139C-AYHR139C-A 312 nt0.02□□□□□ -2.41
RPB11P38902 YGR042WYGR042W 816 nt0.01□□□□□ -2.41
RPB11P38902 YOR282WYOR282W 321 nt0.01□□□□□ -2.41
RPB11P38902 MET32YDR253C 576 nt0□□□□□ -2.41
RPB11P38902 COX12YLR038C 252 nt-0.01□□□□□ -2.41
RPB11P38902 GIM5YML094W 492 nt-0.01□□□□□ -2.41
RPB11P38902 YOR108C-AYOR108C-A 210 nt-0.01□□□□□ -2.41
RPB11P38902 YPL080CYPL080C 327 nt-0.01□□□□□ -2.41
RPB11P38902 snR44snR44 211 nt-0.01□□□□□ -2.41
RPB11P38902 AI1Q0050 2505 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms