Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.61■□□□□ 0.89
HLA-FP30511 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-FP30511 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-FP30511 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HLA-FP30511 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-FP30511 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-FP30511 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HLA-FP30511 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
HLA-FP30511 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-FP30511 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HLA-FP30511 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-FP30511 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-FP30511 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.6■□□□□ 0.89
HLA-FP30511 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.6■□□□□ 0.89
HLA-FP30511 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.6■□□□□ 0.89
HLA-FP30511 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.6■□□□□ 0.89
HLA-FP30511 MTDHP1-201ENST00000605323 784 ntBASIC20.6■□□□□ 0.89
HLA-FP30511 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-FP30511 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-FP30511 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-FP30511 UBE2SP1-201ENST00000450587 669 ntBASIC20.59■□□□□ 0.89
HLA-FP30511 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-FP30511 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.59■□□□□ 0.89
HLA-FP30511 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-FP30511 FAM197Y4-202ENST00000622692 608 ntBASIC20.59■□□□□ 0.89
HLA-FP30511 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-FP30511 PTBP1P-201ENST00000554374 1601 ntBASIC20.59■□□□□ 0.89
HLA-FP30511 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-FP30511 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HLA-FP30511 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-FP30511 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-FP30511 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.58■□□□□ 0.89
HLA-FP30511 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-FP30511 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-FP30511 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-FP30511 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-FP30511 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-FP30511 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-FP30511 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-FP30511 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.58■□□□□ 0.88
HLA-FP30511 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-FP30511 AC007375.3-201ENST00000600936 2314 ntBASIC20.58■□□□□ 0.88
HLA-FP30511 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HLA-FP30511 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-FP30511 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-FP30511 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-FP30511 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-FP30511 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-FP30511 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HLA-FP30511 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-FP30511 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-FP30511 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.56■□□□□ 0.88
HLA-FP30511 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-FP30511 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-FP30511 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.56■□□□□ 0.88
HLA-FP30511 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
HLA-FP30511 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-FP30511 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-FP30511 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms