Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 AC006128.1-201ENST00000624704 1661 ntBASIC18.5■□□□□ 0.55
SHC1P29353 AFG3L1P-217ENST00000557444 2447 ntBASIC18.5■□□□□ 0.55
SHC1P29353 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
SHC1P29353 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SHC1P29353 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC1P29353 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHC1P29353 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SHC1P29353 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
SHC1P29353 AF201337.1-201ENST00000520239 748 ntBASIC18.49■□□□□ 0.55
SHC1P29353 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC1P29353 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SHC1P29353 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC1P29353 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC1P29353 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC1P29353 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC1P29353 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 AL355472.2-201ENST00000422958 438 ntBASIC18.48■□□□□ 0.55
SHC1P29353 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.48■□□□□ 0.55
SHC1P29353 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.48■□□□□ 0.55
SHC1P29353 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC1P29353 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SHC1P29353 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC1P29353 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SHC1P29353 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 CYP21A1P-202ENST00000354927 1481 ntBASIC18.47■□□□□ 0.55
SHC1P29353 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 GPX1P1-201ENST00000388829 606 ntBASIC18.47■□□□□ 0.55
SHC1P29353 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHC1P29353 HLA-L-209ENST00000420110 1011 ntBASIC18.47■□□□□ 0.55
SHC1P29353 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHC1P29353 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC1P29353 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC1P29353 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC1P29353 AC010980.2-201ENST00000587099 1412 ntBASIC18.47■□□□□ 0.55
SHC1P29353 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC1P29353 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC1P29353 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SHC1P29353 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SHC1P29353 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SHC1P29353 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.46■□□□□ 0.55
SHC1P29353 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC1P29353 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC1P29353 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SHC1P29353 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.46■□□□□ 0.55
SHC1P29353 AC027702.1-201ENST00000563810 1770 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms