Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTR1EP28566 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.32■□□□□ 0.68
HTR1EP28566 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
HTR1EP28566 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.32■□□□□ 0.68
HTR1EP28566 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
HTR1EP28566 BX323043.1-201ENST00000641006 1765 ntBASIC19.32■□□□□ 0.68
HTR1EP28566 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.31■□□□□ 0.68
HTR1EP28566 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HTR1EP28566 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
HTR1EP28566 EEF1DP3-203ENST00000566025 782 ntBASIC19.31■□□□□ 0.68
HTR1EP28566 AC053503.5-201ENST00000601508 636 ntBASIC19.31■□□□□ 0.68
HTR1EP28566 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTR1EP28566 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
HTR1EP28566 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1EP28566 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.3■□□□□ 0.68
HTR1EP28566 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
HTR1EP28566 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HTR1EP28566 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.3■□□□□ 0.68
HTR1EP28566 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.3■□□□□ 0.68
HTR1EP28566 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.3■□□□□ 0.68
HTR1EP28566 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.3■□□□□ 0.68
HTR1EP28566 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
HTR1EP28566 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HTR1EP28566 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1EP28566 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.3■□□□□ 0.68
HTR1EP28566 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTR1EP28566 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
HTR1EP28566 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 AC061975.6-201ENST00000579045 1553 ntBASIC19.29■□□□□ 0.68
HTR1EP28566 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HTR1EP28566 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.29■□□□□ 0.68
HTR1EP28566 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.29■□□□□ 0.68
HTR1EP28566 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.29■□□□□ 0.68
HTR1EP28566 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HTR1EP28566 AC018445.3-201ENST00000624177 1945 ntBASIC19.29■□□□□ 0.68
HTR1EP28566 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1EP28566 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HTR1EP28566 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1EP28566 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HTR1EP28566 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HTR1EP28566 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.28■□□□□ 0.68
HTR1EP28566 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.28■□□□□ 0.68
HTR1EP28566 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HTR1EP28566 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms