Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VARSP26640 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
VARSP26640 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VARSP26640 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.81■□□□□ 0.76
VARSP26640 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.81■□□□□ 0.76
VARSP26640 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
VARSP26640 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VARSP26640 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.81■□□□□ 0.76
VARSP26640 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VARSP26640 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VARSP26640 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.8■□□□□ 0.76
VARSP26640 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VARSP26640 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.8■□□□□ 0.76
VARSP26640 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.8■□□□□ 0.76
VARSP26640 AC007322.3-201ENST00000426526 701 ntBASIC19.8■□□□□ 0.76
VARSP26640 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.8■□□□□ 0.76
VARSP26640 DUX4L16-201ENST00000555130 1264 ntBASIC19.8■□□□□ 0.76
VARSP26640 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.8■□□□□ 0.76
VARSP26640 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VARSP26640 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.8■□□□□ 0.76
VARSP26640 AC020907.5-201ENST00000624372 1936 ntBASIC19.8■□□□□ 0.76
VARSP26640 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VARSP26640 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.79■□□□□ 0.76
VARSP26640 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.79■□□□□ 0.76
VARSP26640 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.79■□□□□ 0.76
VARSP26640 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.79■□□□□ 0.76
VARSP26640 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARSP26640 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
VARSP26640 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.79■□□□□ 0.76
VARSP26640 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VARSP26640 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.78■□□□□ 0.76
VARSP26640 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.78■□□□□ 0.76
VARSP26640 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.78■□□□□ 0.76
VARSP26640 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.78■□□□□ 0.76
VARSP26640 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 AC013268.1-206ENST00000638368 961 ntBASIC19.78■□□□□ 0.76
VARSP26640 AC112229.1-201ENST00000639295 961 ntBASIC19.78■□□□□ 0.76
VARSP26640 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VARSP26640 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
VARSP26640 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.78■□□□□ 0.76
VARSP26640 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARSP26640 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
VARSP26640 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VARSP26640 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VARSP26640 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.77■□□□□ 0.76
VARSP26640 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARSP26640 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARSP26640 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
VARSP26640 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms