Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.47■□□□□ 0.39
CD40P25942 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.47■□□□□ 0.39
CD40P25942 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.47■□□□□ 0.39
CD40P25942 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CD40P25942 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.47■□□□□ 0.39
CD40P25942 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD40P25942 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.46■□□□□ 0.39
CD40P25942 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.46■□□□□ 0.39
CD40P25942 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.46■□□□□ 0.39
CD40P25942 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.46■□□□□ 0.39
CD40P25942 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 AC069544.1-201ENST00000609399 999 ntBASIC17.46■□□□□ 0.39
CD40P25942 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.46■□□□□ 0.39
CD40P25942 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD40P25942 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CD40P25942 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.46■□□□□ 0.38
CD40P25942 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CD40P25942 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 AC006128.1-201ENST00000624704 1661 ntBASIC17.45■□□□□ 0.38
CD40P25942 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CD40P25942 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
CD40P25942 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CD40P25942 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CD40P25942 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CD40P25942 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.45■□□□□ 0.38
CD40P25942 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 AC120498.8-201ENST00000614275 531 ntBASIC17.45■□□□□ 0.38
CD40P25942 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD40P25942 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CD40P25942 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CD40P25942 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.44■□□□□ 0.38
CD40P25942 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.44■□□□□ 0.38
CD40P25942 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CD40P25942 AC023632.3-201ENST00000521633 145 ntBASIC17.44■□□□□ 0.38
CD40P25942 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.44■□□□□ 0.38
CD40P25942 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CD40P25942 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 AC233263.1-201ENST00000578059 224 ntBASIC17.44■□□□□ 0.38
CD40P25942 RN7SL471P-201ENST00000580476 299 ntBASIC17.44■□□□□ 0.38
CD40P25942 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CD40P25942 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 AL121603.2-201ENST00000557373 2117 ntBASIC17.44■□□□□ 0.38
CD40P25942 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD40P25942 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.43■□□□□ 0.38
CD40P25942 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CD40P25942 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.43■□□□□ 0.38
CD40P25942 AP006294.2-201ENST00000641667 209 ntBASIC17.43■□□□□ 0.38
CD40P25942 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CD40P25942 FP700111.2-201ENST00000619190 1892 ntBASIC17.43■□□□□ 0.38
CD40P25942 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD40P25942 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms