Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 SDH2YLL041C 801 nt0.57□□□□□ -2.32
CDC39P25655 CDC39YCR093W 6327 nt0.57□□□□□ -2.32
CDC39P25655 MUK1YPL070W 1839 nt0.57□□□□□ -2.32
CDC39P25655 YDR034C-CYDR034C-C 1317 nt0.57□□□□□ -2.32
CDC39P25655 YDR261W-AYDR261W-A 1317 nt0.57□□□□□ -2.32
CDC39P25655 YFL002W-BYFL002W-B 1317 nt0.57□□□□□ -2.32
CDC39P25655 YGR161W-AYGR161W-A 1317 nt0.57□□□□□ -2.32
CDC39P25655 YLR410W-AYLR410W-A 1317 nt0.57□□□□□ -2.32
CDC39P25655 YBL100W-AYBL100W-A 1317 nt0.57□□□□□ -2.32
CDC39P25655 YOR192C-AYOR192C-A 1317 nt0.57□□□□□ -2.32
CDC39P25655 YCL020WYCL020W 1317 nt0.57□□□□□ -2.32
CDC39P25655 SAG1YJR004C 1953 nt0.57□□□□□ -2.32
CDC39P25655 HHT1YBR010W 411 nt0.56□□□□□ -2.32
CDC39P25655 YLL007CYLL007C 1998 nt0.56□□□□□ -2.32
CDC39P25655 SGO1YOR073W 1773 nt0.56□□□□□ -2.32
CDC39P25655 PRP16YKR086W 3216 nt0.56□□□□□ -2.32
CDC39P25655 LAG1YHL003C 1236 nt0.56□□□□□ -2.32
CDC39P25655 SPR2YOR214C 711 nt0.56□□□□□ -2.32
CDC39P25655 ATP15YPL271W 189 nt0.56□□□□□ -2.32
CDC39P25655 HDA3YPR179C 1968 nt0.56□□□□□ -2.32
CDC39P25655 REF2YDR195W 1602 nt0.56□□□□□ -2.32
CDC39P25655 GDS1YOR355W 1569 nt0.55□□□□□ -2.32
CDC39P25655 VPS52YDR484W 1926 nt0.55□□□□□ -2.32
CDC39P25655 NBL1YHR199C-A 222 nt0.55□□□□□ -2.32
CDC39P25655 YIL059CYIL059C 366 nt0.55□□□□□ -2.32
CDC39P25655 YMR304C-AYMR304C-A 351 nt0.55□□□□□ -2.32
CDC39P25655 YPL080CYPL080C 327 nt0.55□□□□□ -2.32
CDC39P25655 YPR172WYPR172W 603 nt0.55□□□□□ -2.32
CDC39P25655 SET3YKR029C 2256 nt0.55□□□□□ -2.32
CDC39P25655 SCW11YGL028C 1629 nt0.55□□□□□ -2.32
CDC39P25655 NUP188YML103C 4968 nt0.55□□□□□ -2.32
CDC39P25655 YOL106WYOL106W 354 nt0.55□□□□□ -2.32
CDC39P25655 TOF2YKR010C 2316 nt0.54□□□□□ -2.32
CDC39P25655 HNT1YDL125C 477 nt0.54□□□□□ -2.32
CDC39P25655 CHZ1YER030W 462 nt0.54□□□□□ -2.32
CDC39P25655 VMA7YGR020C 357 nt0.54□□□□□ -2.32
CDC39P25655 COX8YLR395C 237 nt0.54□□□□□ -2.32
CDC39P25655 DDR48YMR173W 1293 nt0.54□□□□□ -2.32
CDC39P25655 SWS2YNL081C 432 nt0.54□□□□□ -2.32
CDC39P25655 IRC23YOR044W 474 nt0.54□□□□□ -2.32
CDC39P25655 YOR192C-BYOR192C-B 5313 nt0.54□□□□□ -2.32
CDC39P25655 RPS18BYML026C 441 nt0.53□□□□□ -2.32
CDC39P25655 YOR364WYOR364W 369 nt0.53□□□□□ -2.32
CDC39P25655 MET32YDR253C 576 nt0.53□□□□□ -2.32
CDC39P25655 CMS1YLR003C 876 nt0.53□□□□□ -2.32
CDC39P25655 YLR412C-AYLR412C-A 207 nt0.53□□□□□ -2.32
CDC39P25655 YDR509WYDR509W 348 nt0.52□□□□□ -2.33
CDC39P25655 RTR1YER139C 681 nt0.52□□□□□ -2.33
CDC39P25655 YHR050W-AYHR050W-A 171 nt0.52□□□□□ -2.33
CDC39P25655 NUP82YJL061W 2142 nt0.52□□□□□ -2.33
CDC39P25655 COX7YMR256C 183 nt0.52□□□□□ -2.33
CDC39P25655 SWI5YDR146C 2130 nt0.52□□□□□ -2.33
CDC39P25655 YGL109WYGL109W 324 nt0.52□□□□□ -2.33
CDC39P25655 BIR1YJR089W 2865 nt0.51□□□□□ -2.33
CDC39P25655 YBL062WYBL062W 381 nt0.51□□□□□ -2.33
CDC39P25655 SPT21YMR179W 2277 nt0.51□□□□□ -2.33
CDC39P25655 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
CDC39P25655 tT(AGU)BtT(AGU)B 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)CtT(AGU)C 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)DtT(AGU)D 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)HtT(AGU)H 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)I1tT(AGU)I1 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)I2tT(AGU)I2 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)JtT(AGU)J 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)N1tT(AGU)N1 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)N2tT(AGU)N2 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)O1tT(AGU)O1 73 nt0.5□□□□□ -2.33
CDC39P25655 tT(AGU)O2tT(AGU)O2 73 nt0.5□□□□□ -2.33
CDC39P25655 DFG10YIL049W 762 nt0.5□□□□□ -2.33
CDC39P25655 UPS1YLR193C 528 nt0.5□□□□□ -2.33
CDC39P25655 KAP120YPL125W 3099 nt0.5□□□□□ -2.33
CDC39P25655 YPR099CYPR099C 357 nt0.5□□□□□ -2.33
CDC39P25655 LTE1YAL024C 4308 nt0.5□□□□□ -2.33
CDC39P25655 ATC1YDR184C 885 nt0.49□□□□□ -2.33
CDC39P25655 WAR1YML076C 2835 nt0.49□□□□□ -2.33
CDC39P25655 VPS74YDR372C 1038 nt0.49□□□□□ -2.33
CDC39P25655 IRC19YLL033W 693 nt0.49□□□□□ -2.33
CDC39P25655 IES4YOR189W 351 nt0.49□□□□□ -2.33
CDC39P25655 YCL002CYCL002C 792 nt0.49□□□□□ -2.33
CDC39P25655 UTP10YJL109C 5310 nt0.48□□□□□ -2.33
CDC39P25655 YDL196WYDL196W 330 nt0.48□□□□□ -2.33
CDC39P25655 tT(UGU)Q1tT(UGU)Q1 76 nt0.48□□□□□ -2.33
CDC39P25655 UBX4YMR067C 1251 nt0.48□□□□□ -2.33
CDC39P25655 YCS4YLR272C 3531 nt0.47□□□□□ -2.33
CDC39P25655 STB6YKL072W 2301 nt0.47□□□□□ -2.33
CDC39P25655 TRS65YGR166W 1683 nt0.47□□□□□ -2.33
CDC39P25655 YER188C-AYER188C-A 300 nt0.47□□□□□ -2.33
CDC39P25655 YKL111CYKL111C 336 nt0.47□□□□□ -2.33
CDC39P25655 YDL206WYDL206W 2289 nt0.47□□□□□ -2.33
CDC39P25655 SWI4YER111C 3282 nt0.47□□□□□ -2.33
CDC39P25655 YPR159C-AYPR159C-A 102 nt0.46□□□□□ -2.34
CDC39P25655 YDR220CYDR220C 294 nt0.46□□□□□ -2.34
CDC39P25655 TDA2YER071C 381 nt0.46□□□□□ -2.34
CDC39P25655 ACF4YJR083C 930 nt0.46□□□□□ -2.34
CDC39P25655 YLR217WYLR217W 324 nt0.46□□□□□ -2.34
CDC39P25655 AIM9YER080W 1884 nt0.45□□□□□ -2.34
CDC39P25655 AI1Q0050 2505 nt0.45□□□□□ -2.34
CDC39P25655 YHR054CYHR054C 1065 nt0.45□□□□□ -2.34
CDC39P25655 NBP1YLR457C 960 nt0.45□□□□□ -2.34
CDC39P25655 YOR282WYOR282W 321 nt0.45□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms