Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPN3P20807 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CAPN3P20807 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CAPN3P20807 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CAPN3P20807 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPN3P20807 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN3P20807 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN3P20807 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN3P20807 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CAPN3P20807 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.41■□□□□ 0.7
CAPN3P20807 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN3P20807 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 AC079140.4-201ENST00000507448 529 ntBASIC19.41■□□□□ 0.7
CAPN3P20807 AC138907.5-202ENST00000569484 235 ntBASIC19.41■□□□□ 0.7
CAPN3P20807 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 MIR6084-201ENST00000622012 110 ntBASIC19.41■□□□□ 0.7
CAPN3P20807 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CAPN3P20807 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CAPN3P20807 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.41■□□□□ 0.7
CAPN3P20807 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN3P20807 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN3P20807 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN3P20807 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 AC116050.2-201ENST00000612102 1779 ntBASIC19.4■□□□□ 0.7
CAPN3P20807 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN3P20807 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPN3P20807 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CAPN3P20807 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPN3P20807 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN3P20807 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CAPN3P20807 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN3P20807 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN3P20807 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.39■□□□□ 0.7
CAPN3P20807 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN3P20807 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.39■□□□□ 0.7
CAPN3P20807 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.39■□□□□ 0.7
CAPN3P20807 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN3P20807 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.39■□□□□ 0.69
CAPN3P20807 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.39■□□□□ 0.69
CAPN3P20807 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN3P20807 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.69
CAPN3P20807 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN3P20807 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN3P20807 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms