Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 RPH1YER169W 2391 nt2.29□□□□□ -2.04
CDC43P18898 RPA190YOR341W 4995 nt2.28□□□□□ -2.04
CDC43P18898 YBR184WYBR184W 1572 nt2.28□□□□□ -2.04
CDC43P18898 VPH1YOR270C 2523 nt2.28□□□□□ -2.04
CDC43P18898 YLR278CYLR278C 4026 nt2.28□□□□□ -2.04
CDC43P18898 SDC25YLL016W 3147 nt2.28□□□□□ -2.04
CDC43P18898 STE6YKL209C 3873 nt2.28□□□□□ -2.04
CDC43P18898 YOR161W-BYOR161W-B 261 nt2.28□□□□□ -2.04
CDC43P18898 YKU80YMR106C 1890 nt2.28□□□□□ -2.04
CDC43P18898 RAD2YGR258C 3096 nt2.27□□□□□ -2.05
CDC43P18898 YGR067CYGR067C 2415 nt2.27□□□□□ -2.05
CDC43P18898 ORC2YBR060C 1863 nt2.27□□□□□ -2.05
CDC43P18898 PMP1YCR024C-A 123 nt2.27□□□□□ -2.05
CDC43P18898 ACB1YGR037C 264 nt2.27□□□□□ -2.05
CDC43P18898 LRG1YDL240W 3054 nt2.27□□□□□ -2.05
CDC43P18898 FIR1YER032W 2631 nt2.26□□□□□ -2.05
CDC43P18898 YDR098C-BYDR098C-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YDR210C-DYDR210C-D 5268 nt2.26□□□□□ -2.05
CDC43P18898 YDR316W-BYDR316W-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YDR365W-BYDR365W-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YER138CYER138C 5268 nt2.26□□□□□ -2.05
CDC43P18898 YER160CYER160C 5268 nt2.26□□□□□ -2.05
CDC43P18898 YGR038C-BYGR038C-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YGR161C-DYGR161C-D 5268 nt2.26□□□□□ -2.05
CDC43P18898 YJR027WYJR027W 5268 nt2.26□□□□□ -2.05
CDC43P18898 YLR157C-BYLR157C-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YML039WYML039W 5268 nt2.26□□□□□ -2.05
CDC43P18898 YML045WYML045W 5268 nt2.26□□□□□ -2.05
CDC43P18898 YMR050CYMR050C 5268 nt2.26□□□□□ -2.05
CDC43P18898 YOL103W-BYOL103W-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YBR012W-BYBR012W-B 5271 nt2.26□□□□□ -2.05
CDC43P18898 YOR142W-BYOR142W-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YPL257W-BYPL257W-B 5268 nt2.26□□□□□ -2.05
CDC43P18898 YPR158W-BYPR158W-B 5271 nt2.26□□□□□ -2.05
CDC43P18898 ECM12YHR021W-A 456 nt2.26□□□□□ -2.05
CDC43P18898 EMC6YLL014W 327 nt2.26□□□□□ -2.05
CDC43P18898 YOR394C-AYOR394C-A 168 nt2.26□□□□□ -2.05
CDC43P18898 PRP42YDR235W 1635 nt2.26□□□□□ -2.05
CDC43P18898 SLA1YBL007C 3735 nt2.26□□□□□ -2.05
CDC43P18898 FLO5YHR211W 3228 nt2.26□□□□□ -2.05
CDC43P18898 EPL1YFL024C 2499 nt2.26□□□□□ -2.05
CDC43P18898 VMR1YHL035C 4779 nt2.25□□□□□ -2.05
CDC43P18898 RPL42BYHR141C 321 nt2.25□□□□□ -2.05
CDC43P18898 RPL42AYNL162W 321 nt2.25□□□□□ -2.05
CDC43P18898 TAE2YPL009C 3117 nt2.24□□□□□ -2.05
CDC43P18898 SPO21YOL091W 1830 nt2.24□□□□□ -2.05
CDC43P18898 ESC1YMR219W 4977 nt2.24□□□□□ -2.05
CDC43P18898 SNC1YAL030W 354 nt2.24□□□□□ -2.05
CDC43P18898 RPL22AYLR061W 366 nt2.24□□□□□ -2.05
CDC43P18898 YOR345CYOR345C 351 nt2.24□□□□□ -2.05
CDC43P18898 snR43snR43 209 nt2.24□□□□□ -2.05
CDC43P18898 RFX1YLR176C 2436 nt2.24□□□□□ -2.05
CDC43P18898 DUG2YBR281C 2637 nt2.24□□□□□ -2.05
CDC43P18898 PTP3YER075C 2787 nt2.24□□□□□ -2.05
CDC43P18898 IKI3YLR384C 4050 nt2.24□□□□□ -2.05
CDC43P18898 VPS16YPL045W 2397 nt2.23□□□□□ -2.05
CDC43P18898 SUP56tL(CAA)A 82 nt2.23□□□□□ -2.05
CDC43P18898 SUP53tL(CAA)C 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)DtL(CAA)D 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)G1tL(CAA)G1 82 nt2.23□□□□□ -2.05
CDC43P18898 SUP54tL(CAA)G2 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)G3tL(CAA)G3 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)KtL(CAA)K 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)LtL(CAA)L 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)MtL(CAA)M 82 nt2.23□□□□□ -2.05
CDC43P18898 tL(CAA)NtL(CAA)N 82 nt2.23□□□□□ -2.05
CDC43P18898 YHR210CYHR210C 1026 nt2.23□□□□□ -2.05
CDC43P18898 RPL33BYOR234C 324 nt2.23□□□□□ -2.05
CDC43P18898 NUM1YDR150W 8247 nt2.23□□□□□ -2.05
CDC43P18898 PSK1YAL017W 4071 nt2.22□□□□□ -2.05
CDC43P18898 CBF2YGR140W 2871 nt2.22□□□□□ -2.05
CDC43P18898 RIC1YLR039C 3171 nt2.22□□□□□ -2.05
CDC43P18898 YDR182W-AYDR182W-A 204 nt2.22□□□□□ -2.05
CDC43P18898 ULI1YFR026C 510 nt2.22□□□□□ -2.05
CDC43P18898 YJL120WYJL120W 324 nt2.22□□□□□ -2.05
CDC43P18898 RPS22AYJL190C 393 nt2.22□□□□□ -2.05
CDC43P18898 PAU8YAL068C 363 nt2.22□□□□□ -2.05
CDC43P18898 PAU18YLL064C 363 nt2.22□□□□□ -2.05
CDC43P18898 PAU6YNR076W 363 nt2.22□□□□□ -2.05
CDC43P18898 PAU20YOL161C 363 nt2.22□□□□□ -2.05
CDC43P18898 YBR174CYBR174C 315 nt2.22□□□□□ -2.05
CDC43P18898 SCH9YHR205W 2475 nt2.22□□□□□ -2.05
CDC43P18898 INP51YIL002C 2841 nt2.21□□□□□ -2.06
CDC43P18898 YIL169CYIL169C 2988 nt2.21□□□□□ -2.06
CDC43P18898 PUT3YKL015W 2940 nt2.21□□□□□ -2.06
CDC43P18898 KTI11YBL071W-A 249 nt2.21□□□□□ -2.06
CDC43P18898 RPB10YOR210W 213 nt2.21□□□□□ -2.06
CDC43P18898 SMY1YKL079W 1971 nt2.21□□□□□ -2.06
CDC43P18898 LYS14YDR034C 2373 nt2.21□□□□□ -2.06
CDC43P18898 YDR524C-AYDR524C-A 120 nt2.2□□□□□ -2.06
CDC43P18898 RPL34BYIL052C 366 nt2.2□□□□□ -2.06
CDC43P18898 YBL109WYBL109W 336 nt2.2□□□□□ -2.06
CDC43P18898 YOR218CYOR218C 420 nt2.2□□□□□ -2.06
CDC43P18898 NMD2YHR077C 3270 nt2.2□□□□□ -2.06
CDC43P18898 COY1YKL179C 2040 nt2.2□□□□□ -2.06
CDC43P18898 AFI1YOR129C 2682 nt2.2□□□□□ -2.06
CDC43P18898 CAF120YNL278W 3183 nt2.2□□□□□ -2.06
CDC43P18898 ECM21YBL101C 3354 nt2.19□□□□□ -2.06
CDC43P18898 MGM1YOR211C 2646 nt2.19□□□□□ -2.06
CDC43P18898 YHR073W-AYHR073W-A 177 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms