Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
VCLP18206 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCLP18206 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VCLP18206 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VCLP18206 AC100791.3-201ENST00000617619 330 ntBASIC20.26■□□□□ 0.83
VCLP18206 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VCLP18206 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
VCLP18206 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.26■□□□□ 0.83
VCLP18206 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.26■□□□□ 0.83
VCLP18206 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VCLP18206 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
VCLP18206 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.26■□□□□ 0.83
VCLP18206 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCLP18206 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
VCLP18206 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VCLP18206 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VCLP18206 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
VCLP18206 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.25■□□□□ 0.83
VCLP18206 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
VCLP18206 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.25■□□□□ 0.83
VCLP18206 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.25■□□□□ 0.83
VCLP18206 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
VCLP18206 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
VCLP18206 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCLP18206 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.24■□□□□ 0.83
VCLP18206 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
VCLP18206 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
VCLP18206 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VCLP18206 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VCLP18206 AL355802.2-201ENST00000402069 882 ntBASIC20.24■□□□□ 0.83
VCLP18206 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.24■□□□□ 0.83
VCLP18206 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VCLP18206 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
VCLP18206 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.24■□□□□ 0.83
VCLP18206 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VCLP18206 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VCLP18206 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCLP18206 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
VCLP18206 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
VCLP18206 AC011484.1-201ENST00000377652 1995 ntBASIC20.23■□□□□ 0.83
VCLP18206 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.23■□□□□ 0.83
VCLP18206 AC093787.1-201ENST00000450396 207 ntBASIC20.23■□□□□ 0.83
VCLP18206 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.23■□□□□ 0.83
VCLP18206 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.23■□□□□ 0.83
VCLP18206 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.23■□□□□ 0.83
VCLP18206 AC010980.2-201ENST00000587099 1412 ntBASIC20.23■□□□□ 0.83
VCLP18206 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
VCLP18206 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VCLP18206 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCLP18206 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VCLP18206 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.22■□□□□ 0.83
VCLP18206 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCLP18206 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VCLP18206 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
VCLP18206 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
VCLP18206 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.22■□□□□ 0.83
VCLP18206 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.22■□□□□ 0.83
VCLP18206 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCLP18206 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms