Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS1P17812 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS1P17812 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.33■□□□□ 0.85
CTPS1P17812 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.33■□□□□ 0.85
CTPS1P17812 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTPS1P17812 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS1P17812 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.33■□□□□ 0.84
CTPS1P17812 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS1P17812 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTPS1P17812 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CTPS1P17812 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.32■□□□□ 0.84
CTPS1P17812 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.32■□□□□ 0.84
CTPS1P17812 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.32■□□□□ 0.84
CTPS1P17812 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.32■□□□□ 0.84
CTPS1P17812 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTPS1P17812 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
CTPS1P17812 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTPS1P17812 AC092667.1-201ENST00000434301 2586 ntBASIC20.32■□□□□ 0.84
CTPS1P17812 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTPS1P17812 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTPS1P17812 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CTPS1P17812 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTPS1P17812 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.31■□□□□ 0.84
CTPS1P17812 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.31■□□□□ 0.84
CTPS1P17812 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.31■□□□□ 0.84
CTPS1P17812 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CTPS1P17812 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.31■□□□□ 0.84
CTPS1P17812 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.31■□□□□ 0.84
CTPS1P17812 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTPS1P17812 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CTPS1P17812 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.31■□□□□ 0.84
CTPS1P17812 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTPS1P17812 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
CTPS1P17812 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CTPS1P17812 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CTPS1P17812 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.3■□□□□ 0.84
CTPS1P17812 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 KRT18P6-201ENST00000555540 1265 ntBASIC20.3■□□□□ 0.84
CTPS1P17812 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.3■□□□□ 0.84
CTPS1P17812 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CTPS1P17812 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.3■□□□□ 0.84
CTPS1P17812 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTPS1P17812 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 DPP3P2-201ENST00000416030 1696 ntBASIC20.29■□□□□ 0.84
CTPS1P17812 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.29■□□□□ 0.84
CTPS1P17812 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 RNA5SP413-201ENST00000516373 109 ntBASIC20.29■□□□□ 0.84
CTPS1P17812 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.29■□□□□ 0.84
CTPS1P17812 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.29■□□□□ 0.84
CTPS1P17812 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTPS1P17812 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTPS1P17812 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms