Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 AC142381.2-201ENST00000566120 298 ntBASIC18.1■□□□□ 0.49
MRPL3P09001 AC104187.1-201ENST00000607510 612 ntBASIC18.1■□□□□ 0.49
MRPL3P09001 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MRPL3P09001 AC125437.2-201ENST00000625180 2167 ntBASIC18.1■□□□□ 0.49
MRPL3P09001 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MRPL3P09001 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MRPL3P09001 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.09■□□□□ 0.49
MRPL3P09001 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.09■□□□□ 0.49
MRPL3P09001 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MRPL3P09001 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 IRS3P-201ENST00000223076 1006 ntBASIC18.09■□□□□ 0.49
MRPL3P09001 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.09■□□□□ 0.49
MRPL3P09001 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MRPL3P09001 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
MRPL3P09001 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MRPL3P09001 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
MRPL3P09001 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
MRPL3P09001 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MRPL3P09001 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MRPL3P09001 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.08■□□□□ 0.49
MRPL3P09001 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
MRPL3P09001 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.08■□□□□ 0.49
MRPL3P09001 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.08■□□□□ 0.49
MRPL3P09001 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.08■□□□□ 0.49
MRPL3P09001 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MRPL3P09001 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
MRPL3P09001 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
MRPL3P09001 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MRPL3P09001 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L2-201ENST00000561772 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L6-201ENST00000626483 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L1-201ENST00000627662 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L8-201ENST00000629013 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L3-201ENST00000630187 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L7-201ENST00000630678 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 DUX4L5-201ENST00000630834 1275 ntBASIC18.08■□□□□ 0.48
MRPL3P09001 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
MRPL3P09001 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.08■□□□□ 0.48
MRPL3P09001 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.08■□□□□ 0.48
MRPL3P09001 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MRPL3P09001 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 DPP3P2-201ENST00000416030 1696 ntBASIC18.07■□□□□ 0.48
MRPL3P09001 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.07■□□□□ 0.48
MRPL3P09001 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MRPL3P09001 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MRPL3P09001 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MRPL3P09001 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
MRPL3P09001 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.06■□□□□ 0.48
MRPL3P09001 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MRPL3P09001 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MRPL3P09001 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms