Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LTFP02788 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LTFP02788 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LTFP02788 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
LTFP02788 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.15■□□□□ 0.98
LTFP02788 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.15■□□□□ 0.98
LTFP02788 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.15■□□□□ 0.98
LTFP02788 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.15■□□□□ 0.98
LTFP02788 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.15■□□□□ 0.98
LTFP02788 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.15■□□□□ 0.98
LTFP02788 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LTFP02788 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.15■□□□□ 0.98
LTFP02788 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LTFP02788 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LTFP02788 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LTFP02788 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.14■□□□□ 0.98
LTFP02788 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
LTFP02788 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LTFP02788 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LTFP02788 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LTFP02788 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.14■□□□□ 0.97
LTFP02788 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.14■□□□□ 0.97
LTFP02788 HLA-B-256ENST00000639848 1089 ntBASIC21.14■□□□□ 0.97
LTFP02788 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.14■□□□□ 0.97
LTFP02788 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.14■□□□□ 0.97
LTFP02788 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LTFP02788 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LTFP02788 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LTFP02788 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.13■□□□□ 0.97
LTFP02788 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.13■□□□□ 0.97
LTFP02788 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LTFP02788 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LTFP02788 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LTFP02788 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LTFP02788 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.12■□□□□ 0.97
LTFP02788 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 AC073314.1-201ENST00000568729 2216 ntBASIC21.12■□□□□ 0.97
LTFP02788 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.12■□□□□ 0.97
LTFP02788 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.12■□□□□ 0.97
LTFP02788 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.12■□□□□ 0.97
LTFP02788 RNA5SP413-201ENST00000516373 109 ntBASIC21.12■□□□□ 0.97
LTFP02788 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.12■□□□□ 0.97
LTFP02788 AC060766.5-201ENST00000590539 871 ntBASIC21.12■□□□□ 0.97
LTFP02788 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LTFP02788 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTFP02788 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTFP02788 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LTFP02788 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
LTFP02788 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LTFP02788 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 FEM1AP1-201ENST00000431297 1995 ntBASIC21.11■□□□□ 0.97
LTFP02788 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 CD99P1-205ENST00000527459 561 ntBASIC21.11■□□□□ 0.97
LTFP02788 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.11■□□□□ 0.97
LTFP02788 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LTFP02788 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LTFP02788 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
LTFP02788 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTFP02788 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTFP02788 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTFP02788 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LTFP02788 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms