Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 AC007322.3-201ENST00000426526 701 ntBASIC18.11■□□□□ 0.49
HLA-DQA2P01906 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 MIR2861-201ENST00000636310 90 ntBASIC18.11■□□□□ 0.49
HLA-DQA2P01906 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA2P01906 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA2P01906 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 RBM17P2-201ENST00000616397 1405 ntBASIC18.09■□□□□ 0.49
HLA-DQA2P01906 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQA2P01906 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQA2P01906 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 AC091799.1-201ENST00000422823 811 ntBASIC18.08■□□□□ 0.48
HLA-DQA2P01906 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQA2P01906 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms