Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 KRT18P61-201ENST00000585825 1298 ntBASIC18.24■□□□□ 0.51
PPP1R3DO95685 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 KRT19P1-201ENST00000405746 1186 ntBASIC18.23■□□□□ 0.51
PPP1R3DO95685 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 UBE2DNL-204ENST00000602536 740 ntBASIC18.23■□□□□ 0.51
PPP1R3DO95685 FAM21FP-204ENST00000608637 956 ntBASIC18.23■□□□□ 0.51
PPP1R3DO95685 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.23■□□□□ 0.51
PPP1R3DO95685 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PPP1R3DO95685 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 CDV3P1-201ENST00000471403 739 ntBASIC18.22■□□□□ 0.51
PPP1R3DO95685 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.22■□□□□ 0.51
PPP1R3DO95685 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PPP1R3DO95685 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 RNF165-205ENST00000588679 2904 ntBASIC18.21■□□□□ 0.51
PPP1R3DO95685 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
PPP1R3DO95685 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PPP1R3DO95685 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PPP1R3DO95685 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PPP1R3DO95685 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.5
PPP1R3DO95685 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.5
PPP1R3DO95685 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPP1R3DO95685 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms