Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NKX2-2O95096 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-2O95096 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.7■□□□□ 0.58
NKX2-2O95096 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.7■□□□□ 0.58
NKX2-2O95096 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-2O95096 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-2O95096 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 AL121832.2-201ENST00000610979 668 ntBASIC18.7■□□□□ 0.58
NKX2-2O95096 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-2O95096 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX2-2O95096 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NKX2-2O95096 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
NKX2-2O95096 AC083906.2-201ENST00000511578 360 ntBASIC18.69■□□□□ 0.58
NKX2-2O95096 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.69■□□□□ 0.58
NKX2-2O95096 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
NKX2-2O95096 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX2-2O95096 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.68■□□□□ 0.58
NKX2-2O95096 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.68■□□□□ 0.58
NKX2-2O95096 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.68■□□□□ 0.58
NKX2-2O95096 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.68■□□□□ 0.58
NKX2-2O95096 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
NKX2-2O95096 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.68■□□□□ 0.58
NKX2-2O95096 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX2-2O95096 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
NKX2-2O95096 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.67■□□□□ 0.58
NKX2-2O95096 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.67■□□□□ 0.58
NKX2-2O95096 LSM12P1-201ENST00000411836 588 ntBASIC18.67■□□□□ 0.58
NKX2-2O95096 NCF1B-203ENST00000435988 1254 ntBASIC18.67■□□□□ 0.58
NKX2-2O95096 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.67■□□□□ 0.58
NKX2-2O95096 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.67■□□□□ 0.58
NKX2-2O95096 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.67■□□□□ 0.58
NKX2-2O95096 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NKX2-2O95096 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.67■□□□□ 0.58
NKX2-2O95096 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
NKX2-2O95096 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX2-2O95096 PTBP1P-201ENST00000554374 1601 ntBASIC18.67■□□□□ 0.58
NKX2-2O95096 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-2O95096 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NKX2-2O95096 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-2O95096 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
NKX2-2O95096 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NKX2-2O95096 BX276092.2-201ENST00000417668 665 ntBASIC18.66■□□□□ 0.58
NKX2-2O95096 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NKX2-2O95096 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX2-2O95096 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-2O95096 C2orf69P4-201ENST00000565394 541 ntBASIC18.66■□□□□ 0.58
NKX2-2O95096 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.66■□□□□ 0.58
NKX2-2O95096 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX2-2O95096 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX2-2O95096 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-2O95096 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-2O95096 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-2O95096 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX2-2O95096 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms