Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
BEST1O76090 AC006557.6-201ENST00000623071 864 ntBASIC21.28■■□□□ 1
BEST1O76090 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.28■■□□□ 1
BEST1O76090 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.28■■□□□ 1
BEST1O76090 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
BEST1O76090 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.27■■□□□ 1
BEST1O76090 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.27■■□□□ 1
BEST1O76090 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
BEST1O76090 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 AC026366.1-201ENST00000488803 879 ntBASIC21.27■■□□□ 1
BEST1O76090 UNC93B4-201ENST00000505679 747 ntBASIC21.27■■□□□ 1
BEST1O76090 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.27■■□□□ 1
BEST1O76090 AP003097.1-201ENST00000530657 1135 ntBASIC21.27■■□□□ 1
BEST1O76090 AC005829.2-201ENST00000571422 1056 ntBASIC21.27■■□□□ 1
BEST1O76090 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.27■■□□□ 1
BEST1O76090 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEST1O76090 AC092720.2-201ENST00000602388 1665 ntBASIC21.27■■□□□ 1
BEST1O76090 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.27■□□□□ 0.99
BEST1O76090 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
BEST1O76090 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BEST1O76090 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BEST1O76090 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BEST1O76090 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BEST1O76090 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BEST1O76090 DPP3P2-201ENST00000416030 1696 ntBASIC21.26■□□□□ 0.99
BEST1O76090 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.26■□□□□ 0.99
BEST1O76090 FAM201B-201ENST00000458407 597 ntBASIC21.26■□□□□ 0.99
BEST1O76090 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
BEST1O76090 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.26■□□□□ 0.99
BEST1O76090 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.26■□□□□ 0.99
BEST1O76090 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 SOX15-203ENST00000570788 1093 ntBASIC21.26■□□□□ 0.99
BEST1O76090 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.26■□□□□ 0.99
BEST1O76090 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.26■□□□□ 0.99
BEST1O76090 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BEST1O76090 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BEST1O76090 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.26■□□□□ 0.99
BEST1O76090 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.25■□□□□ 0.99
BEST1O76090 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BEST1O76090 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.25■□□□□ 0.99
BEST1O76090 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.24■□□□□ 0.99
BEST1O76090 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
BEST1O76090 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BEST1O76090 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BEST1O76090 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
BEST1O76090 FEM1AP1-201ENST00000431297 1995 ntBASIC21.23■□□□□ 0.99
BEST1O76090 SMG8-203ENST00000578922 2178 ntBASIC21.23■□□□□ 0.99
BEST1O76090 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.23■□□□□ 0.99
BEST1O76090 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
BEST1O76090 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.23■□□□□ 0.99
BEST1O76090 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.23■□□□□ 0.99
BEST1O76090 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.23■□□□□ 0.99
BEST1O76090 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms