Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 POM121L13P-201ENST00000422362 380 ntBASIC20.75■□□□□ 0.91
RPP40O75818 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.75■□□□□ 0.91
RPP40O75818 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RPP40O75818 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.75■□□□□ 0.91
RPP40O75818 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.75■□□□□ 0.91
RPP40O75818 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP40O75818 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
RPP40O75818 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
RPP40O75818 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
RPP40O75818 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RPP40O75818 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.75■□□□□ 0.91
RPP40O75818 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPP40O75818 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RPP40O75818 AC006128.1-201ENST00000624704 1661 ntBASIC20.74■□□□□ 0.91
RPP40O75818 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPP40O75818 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RPP40O75818 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPP40O75818 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.74■□□□□ 0.91
RPP40O75818 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 KRT18P21-201ENST00000515767 1272 ntBASIC20.74■□□□□ 0.91
RPP40O75818 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.74■□□□□ 0.91
RPP40O75818 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPP40O75818 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP40O75818 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPP40O75818 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
RPP40O75818 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.73■□□□□ 0.91
RPP40O75818 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.73■□□□□ 0.91
RPP40O75818 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.73■□□□□ 0.91
RPP40O75818 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.73■□□□□ 0.91
RPP40O75818 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.73■□□□□ 0.91
RPP40O75818 BX088651.1-201ENST00000540551 451 ntBASIC20.73■□□□□ 0.91
RPP40O75818 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RPP40O75818 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP40O75818 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RPP40O75818 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.72■□□□□ 0.91
RPP40O75818 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.72■□□□□ 0.91
RPP40O75818 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 AC012618.2-201ENST00000428058 849 ntBASIC20.72■□□□□ 0.91
RPP40O75818 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.72■□□□□ 0.91
RPP40O75818 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.72■□□□□ 0.91
RPP40O75818 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.72■□□□□ 0.91
RPP40O75818 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPP40O75818 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP40O75818 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP40O75818 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP40O75818 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPP40O75818 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.71■□□□□ 0.91
RPP40O75818 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPP40O75818 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms