Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GPC4O75487 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.2■□□□□ 0.82
GPC4O75487 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.2■□□□□ 0.82
GPC4O75487 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GPC4O75487 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
GPC4O75487 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
GPC4O75487 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
GPC4O75487 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 AC007322.1-201ENST00000426983 750 ntBASIC20.19■□□□□ 0.82
GPC4O75487 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.19■□□□□ 0.82
GPC4O75487 FAM21FP-204ENST00000608637 956 ntBASIC20.19■□□□□ 0.82
GPC4O75487 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.19■□□□□ 0.82
GPC4O75487 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.19■□□□□ 0.82
GPC4O75487 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GPC4O75487 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
GPC4O75487 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.19■□□□□ 0.82
GPC4O75487 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.19■□□□□ 0.82
GPC4O75487 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GPC4O75487 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GPC4O75487 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 AC016405.3-201ENST00000607710 860 ntBASIC20.18■□□□□ 0.82
GPC4O75487 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GPC4O75487 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.18■□□□□ 0.82
GPC4O75487 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.18■□□□□ 0.82
GPC4O75487 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
GPC4O75487 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.17■□□□□ 0.82
GPC4O75487 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GPC4O75487 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GPC4O75487 AC027702.1-201ENST00000563810 1770 ntBASIC20.17■□□□□ 0.82
GPC4O75487 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GPC4O75487 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.17■□□□□ 0.82
GPC4O75487 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.17■□□□□ 0.82
GPC4O75487 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GPC4O75487 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GPC4O75487 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC4O75487 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
GPC4O75487 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GPC4O75487 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC4O75487 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC4O75487 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.16■□□□□ 0.82
GPC4O75487 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.16■□□□□ 0.82
GPC4O75487 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GPC4O75487 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GPC4O75487 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GPC4O75487 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms