Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM3O75382 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM3O75382 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM3O75382 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM3O75382 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM3O75382 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM3O75382 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM3O75382 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM3O75382 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM3O75382 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRIM3O75382 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM3O75382 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM3O75382 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRIM3O75382 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM3O75382 MCRIP2P1-201ENST00000394346 511 ntBASIC18.77■□□□□ 0.6
TRIM3O75382 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.77■□□□□ 0.6
TRIM3O75382 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM3O75382 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM3O75382 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM3O75382 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM3O75382 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM3O75382 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.77■□□□□ 0.59
TRIM3O75382 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM3O75382 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM3O75382 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRIM3O75382 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM3O75382 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM3O75382 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM3O75382 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM3O75382 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM3O75382 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM3O75382 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TRIM3O75382 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM3O75382 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM3O75382 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM3O75382 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM3O75382 CYP2T3P-201ENST00000601990 817 ntBASIC18.76■□□□□ 0.59
TRIM3O75382 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM3O75382 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM3O75382 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM3O75382 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM3O75382 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM3O75382 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM3O75382 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM3O75382 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRIM3O75382 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM3O75382 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 AL355472.2-201ENST00000422958 438 ntBASIC18.75■□□□□ 0.59
TRIM3O75382 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM3O75382 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRIM3O75382 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM3O75382 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms