Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 KRT17P2-201ENST00000300992 1314 ntBASIC20.05■□□□□ 0.8
PCDHGA12O60330 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 AP001412.1-201ENST00000608405 714 ntBASIC20.05■□□□□ 0.8
PCDHGA12O60330 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA12O60330 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA12O60330 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 AC087633.2-202ENST00000565166 1439 ntBASIC20.04■□□□□ 0.8
PCDHGA12O60330 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA12O60330 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 AC124016.1-201ENST00000609552 612 ntBASIC20.04■□□□□ 0.8
PCDHGA12O60330 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA12O60330 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 AL135905.2-201ENST00000584934 1404 ntBASIC20.03■□□□□ 0.8
PCDHGA12O60330 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.03■□□□□ 0.8
PCDHGA12O60330 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 BX088651.1-201ENST00000540551 451 ntBASIC20.03■□□□□ 0.8
PCDHGA12O60330 AC120498.8-201ENST00000614275 531 ntBASIC20.03■□□□□ 0.8
PCDHGA12O60330 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA12O60330 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA12O60330 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 MIR1224-201ENST00000408193 85 ntBASIC20.02■□□□□ 0.8
PCDHGA12O60330 PGM5P4-201ENST00000421970 445 ntBASIC20.02■□□□□ 0.8
PCDHGA12O60330 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA12O60330 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA12O60330 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
PCDHGA12O60330 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA12O60330 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PCDHGA12O60330 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA12O60330 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA12O60330 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA12O60330 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA12O60330 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms