Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC28A2O43868 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC28A2O43868 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.44■□□□□ 0.7
SLC28A2O43868 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC28A2O43868 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC28A2O43868 PLK5-205ENST00000642079 1969 ntBASIC19.44■□□□□ 0.7
SLC28A2O43868 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC28A2O43868 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC28A2O43868 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC28A2O43868 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC28A2O43868 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SLC28A2O43868 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC28A2O43868 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SLC28A2O43868 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC28A2O43868 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 AC138907.5-202ENST00000569484 235 ntBASIC19.43■□□□□ 0.7
SLC28A2O43868 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC28A2O43868 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC28A2O43868 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SLC28A2O43868 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 LINC01521-201ENST00000504184 1943 ntBASIC19.43■□□□□ 0.7
SLC28A2O43868 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC28A2O43868 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC28A2O43868 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 AC121338.2-201ENST00000622535 1744 ntBASIC19.42■□□□□ 0.7
SLC28A2O43868 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC28A2O43868 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC28A2O43868 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC28A2O43868 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC28A2O43868 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC28A2O43868 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC28A2O43868 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLC28A2O43868 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC28A2O43868 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC28A2O43868 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC28A2O43868 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC28A2O43868 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.41■□□□□ 0.7
SLC28A2O43868 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC28A2O43868 EEF1DP3-203ENST00000566025 782 ntBASIC19.41■□□□□ 0.7
SLC28A2O43868 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 AC053503.5-201ENST00000601508 636 ntBASIC19.41■□□□□ 0.7
SLC28A2O43868 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.41■□□□□ 0.7
SLC28A2O43868 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC28A2O43868 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC28A2O43868 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SLC28A2O43868 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC28A2O43868 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC28A2O43868 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC28A2O43868 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC28A2O43868 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC28A2O43868 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SLC28A2O43868 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC28A2O43868 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC28A2O43868 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.4■□□□□ 0.7
SLC28A2O43868 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC28A2O43868 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC28A2O43868 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC28A2O43868 FEM1AP1-201ENST00000431297 1995 ntBASIC19.4■□□□□ 0.7
SLC28A2O43868 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC28A2O43868 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms