Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PROM1O43490 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PROM1O43490 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
PROM1O43490 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.19■□□□□ 0.66
PROM1O43490 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PROM1O43490 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.18■□□□□ 0.66
PROM1O43490 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.18■□□□□ 0.66
PROM1O43490 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.18■□□□□ 0.66
PROM1O43490 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PROM1O43490 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.18■□□□□ 0.66
PROM1O43490 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
PROM1O43490 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PROM1O43490 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PROM1O43490 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.17■□□□□ 0.66
PROM1O43490 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
PROM1O43490 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 AC083906.2-201ENST00000511578 360 ntBASIC19.17■□□□□ 0.66
PROM1O43490 AL121832.2-201ENST00000610979 668 ntBASIC19.17■□□□□ 0.66
PROM1O43490 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PROM1O43490 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.17■□□□□ 0.66
PROM1O43490 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.17■□□□□ 0.66
PROM1O43490 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.17■□□□□ 0.66
PROM1O43490 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PROM1O43490 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PROM1O43490 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.16■□□□□ 0.66
PROM1O43490 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.16■□□□□ 0.66
PROM1O43490 NCF1B-203ENST00000435988 1254 ntBASIC19.16■□□□□ 0.66
PROM1O43490 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.16■□□□□ 0.66
PROM1O43490 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.16■□□□□ 0.66
PROM1O43490 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 AC105020.6-201ENST00000621523 1217 ntBASIC19.16■□□□□ 0.66
PROM1O43490 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.16■□□□□ 0.66
PROM1O43490 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.16■□□□□ 0.66
PROM1O43490 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.16■□□□□ 0.66
PROM1O43490 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PROM1O43490 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
PROM1O43490 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.15■□□□□ 0.66
PROM1O43490 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.15■□□□□ 0.66
PROM1O43490 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 MKRN4P-201ENST00000444706 1521 ntBASIC19.15■□□□□ 0.66
PROM1O43490 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.15■□□□□ 0.66
PROM1O43490 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PROM1O43490 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.15■□□□□ 0.66
PROM1O43490 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PROM1O43490 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.15■□□□□ 0.66
PROM1O43490 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PROM1O43490 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
PROM1O43490 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.15■□□□□ 0.66
PROM1O43490 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.15■□□□□ 0.66
PROM1O43490 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
PROM1O43490 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms