Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NTF6G-201ENST00000591094 616 ntBASIC20.09■□□□□ 0.81
PHGDHO43175 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PHGDHO43175 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.09■□□□□ 0.81
PHGDHO43175 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PHGDHO43175 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.08■□□□□ 0.81
PHGDHO43175 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.08■□□□□ 0.81
PHGDHO43175 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.08■□□□□ 0.81
PHGDHO43175 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.08■□□□□ 0.81
PHGDHO43175 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 AC007952.6-201ENST00000573168 2673 ntBASIC20.08■□□□□ 0.81
PHGDHO43175 AC003957.1-201ENST00000625108 2673 ntBASIC20.08■□□□□ 0.81
PHGDHO43175 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PHGDHO43175 FAM21FP-204ENST00000608637 956 ntBASIC20.08■□□□□ 0.81
PHGDHO43175 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHGDHO43175 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PHGDHO43175 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHGDHO43175 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHGDHO43175 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
PHGDHO43175 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PHGDHO43175 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.08■□□□□ 0.8
PHGDHO43175 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.08■□□□□ 0.8
PHGDHO43175 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
PHGDHO43175 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PHGDHO43175 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PHGDHO43175 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.07■□□□□ 0.8
PHGDHO43175 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.07■□□□□ 0.8
PHGDHO43175 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.07■□□□□ 0.8
PHGDHO43175 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PHGDHO43175 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.07■□□□□ 0.8
PHGDHO43175 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.06■□□□□ 0.8
PHGDHO43175 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.06■□□□□ 0.8
PHGDHO43175 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.06■□□□□ 0.8
PHGDHO43175 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.06■□□□□ 0.8
PHGDHO43175 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.06■□□□□ 0.8
PHGDHO43175 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.06■□□□□ 0.8
PHGDHO43175 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.06■□□□□ 0.8
PHGDHO43175 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.06■□□□□ 0.8
PHGDHO43175 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.06■□□□□ 0.8
PHGDHO43175 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PHGDHO43175 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PHGDHO43175 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.05■□□□□ 0.8
PHGDHO43175 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
PHGDHO43175 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.05■□□□□ 0.8
PHGDHO43175 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PHGDHO43175 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.05■□□□□ 0.8
PHGDHO43175 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.05■□□□□ 0.8
PHGDHO43175 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHGDHO43175 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms