Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RRP8O43159 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.06■□□□□ 0.64
RRP8O43159 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.06■□□□□ 0.64
RRP8O43159 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 AC079598.2-202ENST00000546624 1451 ntBASIC19.06■□□□□ 0.64
RRP8O43159 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 AP002982.1-201ENST00000492365 877 ntBASIC19.06■□□□□ 0.64
RRP8O43159 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.06■□□□□ 0.64
RRP8O43159 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.06■□□□□ 0.64
RRP8O43159 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
RRP8O43159 AC004264.1-201ENST00000608354 794 ntBASIC19.06■□□□□ 0.64
RRP8O43159 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.06■□□□□ 0.64
RRP8O43159 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RRP8O43159 AC127496.7-201ENST00000625110 1798 ntBASIC19.06■□□□□ 0.64
RRP8O43159 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RRP8O43159 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RRP8O43159 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.05■□□□□ 0.64
RRP8O43159 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RRP8O43159 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.05■□□□□ 0.64
RRP8O43159 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RRP8O43159 REXO1L10P-201ENST00000615707 1290 ntBASIC19.05■□□□□ 0.64
RRP8O43159 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 KRT8P9-201ENST00000558927 1449 ntBASIC19.05■□□□□ 0.64
RRP8O43159 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 ECEL1P1-201ENST00000373592 1742 ntBASIC19.05■□□□□ 0.64
RRP8O43159 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.05■□□□□ 0.64
RRP8O43159 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.05■□□□□ 0.64
RRP8O43159 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 LINC00565-201ENST00000562710 2331 ntBASIC19.05■□□□□ 0.64
RRP8O43159 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RRP8O43159 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
RRP8O43159 GUSBP5-202ENST00000510805 1989 ntBASIC19.04■□□□□ 0.64
RRP8O43159 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.04■□□□□ 0.64
RRP8O43159 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.04■□□□□ 0.64
RRP8O43159 LIN28AP1-201ENST00000429574 405 ntBASIC19.04■□□□□ 0.64
RRP8O43159 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 SLC25A3P1-201ENST00000443844 931 ntBASIC19.04■□□□□ 0.64
RRP8O43159 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.04■□□□□ 0.64
RRP8O43159 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.04■□□□□ 0.64
RRP8O43159 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
RRP8O43159 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
RRP8O43159 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RRP8O43159 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RRP8O43159 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.04■□□□□ 0.64
RRP8O43159 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.03■□□□□ 0.64
RRP8O43159 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.03■□□□□ 0.64
RRP8O43159 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.03■□□□□ 0.64
RRP8O43159 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RRP8O43159 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms