Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.63■□□□□ 0.73
UBFD1O14562 FAM21FP-204ENST00000608637 956 ntBASIC19.63■□□□□ 0.73
UBFD1O14562 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UBFD1O14562 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBFD1O14562 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBFD1O14562 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
UBFD1O14562 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBFD1O14562 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.62■□□□□ 0.73
UBFD1O14562 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.62■□□□□ 0.73
UBFD1O14562 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.62■□□□□ 0.73
UBFD1O14562 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UBFD1O14562 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.62■□□□□ 0.73
UBFD1O14562 MYCNOS-205ENST00000641950 531 ntBASIC19.62■□□□□ 0.73
UBFD1O14562 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.62■□□□□ 0.73
UBFD1O14562 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBFD1O14562 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBFD1O14562 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.61■□□□□ 0.73
UBFD1O14562 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UBFD1O14562 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
UBFD1O14562 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.61■□□□□ 0.73
UBFD1O14562 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.61■□□□□ 0.73
UBFD1O14562 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBFD1O14562 CDV3P1-201ENST00000471403 739 ntBASIC19.61■□□□□ 0.73
UBFD1O14562 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.61■□□□□ 0.73
UBFD1O14562 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.61■□□□□ 0.73
UBFD1O14562 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBFD1O14562 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBFD1O14562 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.61■□□□□ 0.73
UBFD1O14562 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
UBFD1O14562 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.6■□□□□ 0.73
UBFD1O14562 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.6■□□□□ 0.73
UBFD1O14562 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.6■□□□□ 0.73
UBFD1O14562 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.6■□□□□ 0.73
UBFD1O14562 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBFD1O14562 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBFD1O14562 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBFD1O14562 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBFD1O14562 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBFD1O14562 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBFD1O14562 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBFD1O14562 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.59■□□□□ 0.73
UBFD1O14562 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.59■□□□□ 0.73
UBFD1O14562 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
UBFD1O14562 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UBFD1O14562 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBFD1O14562 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBFD1O14562 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBFD1O14562 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.58■□□□□ 0.73
UBFD1O14562 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
UBFD1O14562 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBFD1O14562 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
UBFD1O14562 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.58■□□□□ 0.72
UBFD1O14562 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
UBFD1O14562 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms