Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPB4C9JG80 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPB4C9JG80 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPB4C9JG80 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPB4C9JG80 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 AC080038.1-201ENST00000611274 1154 ntBASIC17.93■□□□□ 0.46
NPIPB4C9JG80 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPB4C9JG80 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.92■□□□□ 0.46
NPIPB4C9JG80 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 AC073111.5-205ENST00000641717 521 ntBASIC17.92■□□□□ 0.46
NPIPB4C9JG80 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPB4C9JG80 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 AL031963.3-201ENST00000606441 850 ntBASIC17.91■□□□□ 0.46
NPIPB4C9JG80 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NPIPB4C9JG80 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 AC004911.1-201ENST00000416316 871 ntBASIC17.9■□□□□ 0.46
NPIPB4C9JG80 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 AL137784.2-201ENST00000607332 1000 ntBASIC17.9■□□□□ 0.46
NPIPB4C9JG80 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPB4C9JG80 KRT8P17-201ENST00000453110 1448 ntBASIC17.89■□□□□ 0.46
NPIPB4C9JG80 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPB4C9JG80 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPB4C9JG80 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPB4C9JG80 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPB4C9JG80 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NPIPB4C9JG80 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPB4C9JG80 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPB4C9JG80 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPB4C9JG80 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPB4C9JG80 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms