Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC005332.7-201ENST00000614046 2005 ntBASIC21.51■■□□□ 1.03
RCCD1A6NED2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 AC243732.1-201ENST00000612648 864 ntBASIC21.51■■□□□ 1.03
RCCD1A6NED2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RCCD1A6NED2 BX323043.1-201ENST00000641006 1765 ntBASIC21.51■■□□□ 1.03
RCCD1A6NED2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RCCD1A6NED2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 LINC02228-203ENST00000641970 1355 ntBASIC21.5■■□□□ 1.03
RCCD1A6NED2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 AC093484.2-201ENST00000580996 2166 ntBASIC21.5■■□□□ 1.03
RCCD1A6NED2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 AC105265.2-201ENST00000467189 838 ntBASIC21.5■■□□□ 1.03
RCCD1A6NED2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 CCDC92B-201ENST00000575506 885 ntBASIC21.5■■□□□ 1.03
RCCD1A6NED2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.5■■□□□ 1.03
RCCD1A6NED2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RCCD1A6NED2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 AC007322.3-201ENST00000426526 701 ntBASIC21.49■■□□□ 1.03
RCCD1A6NED2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RCCD1A6NED2 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.49■■□□□ 1.03
RCCD1A6NED2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.49■■□□□ 1.03
RCCD1A6NED2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.48■■□□□ 1.03
RCCD1A6NED2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RCCD1A6NED2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RCCD1A6NED2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.47■■□□□ 1.03
RCCD1A6NED2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RCCD1A6NED2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.47■■□□□ 1.03
RCCD1A6NED2 TERF1P2-201ENST00000583350 1212 ntBASIC21.47■■□□□ 1.03
RCCD1A6NED2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms