Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
SBNO1A3KN83 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SBNO1A3KN83 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SBNO1A3KN83 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SBNO1A3KN83 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SBNO1A3KN83 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SBNO1A3KN83 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 KRT18P57-201ENST00000443599 1254 ntBASIC27.61■■■□□ 2.01
SBNO1A3KN83 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SBNO1A3KN83 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SBNO1A3KN83 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SBNO1A3KN83 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SBNO1A3KN83 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.61■■■□□ 2.01
SBNO1A3KN83 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SBNO1A3KN83 CRAT-202ENST00000393384 973 ntTSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 LINC01568-207ENST00000641790 1380 ntBASIC27.6■■■□□ 2.01
SBNO1A3KN83 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SBNO1A3KN83 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SBNO1A3KN83 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SBNO1A3KN83 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SBNO1A3KN83 MIR1238-201ENST00000408483 83 ntBASIC27.6■■■□□ 2.01
SBNO1A3KN83 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC27.6■■■□□ 2.01
SBNO1A3KN83 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 AC116562.2-201ENST00000507042 360 ntBASIC27.59■■■□□ 2.01
SBNO1A3KN83 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SBNO1A3KN83 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 FITM1-202ENST00000559294 800 ntBASIC27.59■■■□□ 2.01
SBNO1A3KN83 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC27.59■■■□□ 2.01
SBNO1A3KN83 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SBNO1A3KN83 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.58■■■□□ 2.01
SBNO1A3KN83 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SBNO1A3KN83 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SBNO1A3KN83 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SBNO1A3KN83 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.58■■■□□ 2.01
SBNO1A3KN83 AC010947.1-201ENST00000623454 693 ntBASIC27.58■■■□□ 2.01
SBNO1A3KN83 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SBNO1A3KN83 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SBNO1A3KN83 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
SBNO1A3KN83 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2
SBNO1A3KN83 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27.58■■■□□ 2
SBNO1A3KN83 CYP2D8P-201ENST00000433633 1490 ntBASIC27.57■■■□□ 2
SBNO1A3KN83 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.57■■■□□ 2
SBNO1A3KN83 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC27.57■■■□□ 2
SBNO1A3KN83 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
SBNO1A3KN83 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC27.57■■■□□ 2
SBNO1A3KN83 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.57■■■□□ 2
SBNO1A3KN83 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC27.57■■■□□ 2
SBNO1A3KN83 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
SBNO1A3KN83 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC27.57■■■□□ 2
SBNO1A3KN83 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
SBNO1A3KN83 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SBNO1A3KN83 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.56■■■□□ 2
SBNO1A3KN83 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.56■■■□□ 2
SBNO1A3KN83 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
SBNO1A3KN83 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC27.56■■■□□ 2
SBNO1A3KN83 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27.56■■■□□ 2
SBNO1A3KN83 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC27.56■■■□□ 2
SBNO1A3KN83 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SBNO1A3KN83 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC27.56■■■□□ 2
SBNO1A3KN83 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 SLC25A3P1-201ENST00000443844 931 ntBASIC27.55■■■□□ 2
SBNO1A3KN83 AP002982.1-201ENST00000492365 877 ntBASIC27.55■■■□□ 2
SBNO1A3KN83 NAPSB-206ENST00000562112 1266 ntBASIC27.55■■■□□ 2
SBNO1A3KN83 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.55■■■□□ 2
SBNO1A3KN83 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SBNO1A3KN83 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms