Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 POU5F1P4-201ENST00000413175 1085 ntBASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV3S1A0A5B6 AC116050.2-201ENST00000612102 1779 ntBASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 MIR4466-201ENST00000606121 54 ntBASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 KRT8P36-201ENST00000489121 1440 ntBASIC18.91■□□□□ 0.62
TCRBV3S1A0A5B6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 AC026471.1-201ENST00000564629 3026 ntBASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 AC105233.4-201ENST00000642045 216 ntBASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 LETM1P2-201ENST00000597330 2178 ntBASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV3S1A0A5B6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV3S1A0A5B6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV3S1A0A5B6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AL138781.2-201ENST00000617896 1843 ntBASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AC245052.3-201ENST00000450182 901 ntBASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AC233992.3-201ENST00000607491 485 ntBASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 AC008175.2-201ENST00000612840 297 ntBASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV3S1A0A5B6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms