Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SMG8-203ENST00000578922 2178 ntBASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC087633.2-202ENST00000565166 1439 ntBASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 UBE2DNL-204ENST00000602536 740 ntBASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AL591742.1-201ENST00000604433 565 ntBASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 DPP3P2-201ENST00000416030 1696 ntBASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TERF1P5-201ENST00000477545 1207 ntBASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AL356652.1-201ENST00000615962 565 ntBASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC112907.3-201ENST00000577781 2400 ntBASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ZNRF2P3-201ENST00000424200 374 ntBASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC007322.4-201ENST00000509611 723 ntBASIC14.23□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms