Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 AC027702.1-201ENST00000563810 1770 ntBASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TRAV10A0A0B4J240 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV10A0A0B4J240 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 AC006557.6-201ENST00000623071 864 ntBASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MIR2861-201ENST00000636310 90 ntBASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 AC121338.2-201ENST00000622535 1744 ntBASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV10A0A0B4J240 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AL049796.1-201ENST00000565336 1766 ntBASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AC008550.1-201ENST00000511500 884 ntBASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 AC120498.8-201ENST00000614275 531 ntBASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms