Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 AL121832.2-201ENST00000610979 668 ntBASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 AC105020.6-201ENST00000621523 1217 ntBASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 FP700111.2-201ENST00000619190 1892 ntBASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV2A0A0B4J234 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 CROCCP5-201ENST00000436658 830 ntBASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV2A0A0B4J234 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 AC092720.2-201ENST00000602388 1665 ntBASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV2A0A0B4J234 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms