Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV27A0A087WT01 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV27A0A087WT01 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV27A0A087WT01 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 AC034268.1-201ENST00000441047 882 ntBASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV27A0A087WT01 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 AC007952.6-201ENST00000573168 2673 ntBASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 AC003957.1-201ENST00000625108 2673 ntBASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV27A0A087WT01 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms