Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
NPIPA3F8WFD2 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 Z82209.2-201ENST00000623410 2012 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC073349.2-201ENST00000427545 1603 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 RNA5SP426-201ENST00000362901 121 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 FTH1P26-201ENST00000406512 701 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 NFU1P1-201ENST00000413128 774 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 RPL19P21-201ENST00000424919 591 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC243962.1-201ENST00000441512 579 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 OR7H1P-201ENST00000448965 922 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 FGF12-206ENST00000450716 768 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 PGGT1BP1-201ENST00000455321 1023 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 RNA5SP101-201ENST00000517036 108 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC136944.5-201ENST00000573021 151 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 RN7SL785P-201ENST00000578437 253 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC010385.2-201ENST00000603743 490 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL451054.3-201ENST00000611115 776 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC103974.2-201ENST00000611319 778 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC084876.1-201ENST00000612793 641 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC087742.2-201ENST00000616113 740 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC243830.3-201ENST00000616810 376 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 TRIM60P19-201ENST00000452879 1462 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 AL391666.1-201ENST00000442570 2764 ntBASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
NPIPA3F8WFD2 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 RN7SKP133-201ENST00000364845 340 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 GLRX3P2-201ENST00000405027 1038 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 SNORD3J-201ENST00000408473 190 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 EEF1A1P31-201ENST00000415978 1131 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 RBMY2FP-202ENST00000420346 1263 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL049758.1-201ENST00000423154 397 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms