Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC114786.2-201ENST00000510090 1426 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 NBPF25P-201ENST00000606775 2019 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RNA5SP263-201ENST00000363376 128 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 HMGB1P39-201ENST00000366304 880 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RNU1-11P-201ENST00000383975 164 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 SLC25A5P2-201ENST00000413713 897 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RBMY2GP-201ENST00000418671 1034 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RBMY2NP-201ENST00000434454 1028 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 HSD3BP5-201ENST00000434856 1132 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC116353.1-201ENST00000489727 316 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AL031864.2-201ENST00000498507 350 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AL449212.1-201ENST00000499853 517 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 DNM1P34-202ENST00000567850 315 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC134981.1-201ENST00000628076 348 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AP001527.1-201ENST00000566440 1957 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LMO3Q8TAP4 AC073065.1-201ENST00000411678 2866 ntBASIC8.55□□□□□ -1.04
LMO3Q8TAP4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 XRCC6P2-201ENST00000457831 1822 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC026464.2-201ENST00000567834 2421 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC009163.7-201ENST00000621929 2557 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC092718.7-201ENST00000623577 1776 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AL035698.1-201ENST00000405812 564 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AL031282.1-204ENST00000418950 497 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 FAF2P1-201ENST00000429974 1298 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 RPL7AP26-201ENST00000488538 813 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC107385.1-201ENST00000507985 778 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 RN7SKP2-201ENST00000517003 319 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC025252.2-201ENST00000537470 502 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC087623.4-201ENST00000606593 695 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 CGA-202ENST00000610310 615 ntTSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AC244517.3-201ENST00000616254 1235 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AP000356.4-201ENST00000639500 172 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
LMO3Q8TAP4 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.54□□□□□ -1.04
LMO3Q8TAP4 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms