Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RN7SL536P-201ENST00000612366 290 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC131159.2-201ENST00000613236 702 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 AC026333.4-201ENST00000613543 544 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RN7SL545P-201ENST00000620547 290 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 RN7SL759P-201ENST00000620768 290 ntBASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC7.48□□□□□ -1.21
NPIPA3F8WFD2 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC093616.1-201ENST00000427434 2095 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 VN2R17P-201ENST00000391712 832 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC096664.1-201ENST00000393996 778 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 VN1R13P-201ENST00000406212 885 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 RN7SKP127-201ENST00000410443 354 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 RNA5SP265-201ENST00000411023 111 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 GNAI2P2-201ENST00000417003 916 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ACTP1-201ENST00000440793 383 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 PHBP9-201ENST00000453578 825 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 RN7SL74P-201ENST00000464966 299 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 RN7SL63P-201ENST00000468228 304 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC112484.4-201ENST00000567253 811 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC006557.4-201ENST00000585516 830 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC078899.4-201ENST00000593952 1113 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AL109933.4-201ENST00000612111 157 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC016999.2-201ENST00000614692 556 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC024580.1-201ENST00000623020 674 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC012513.3-201ENST00000623250 2116 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC126474.1-201ENST00000623555 1293 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC010533.1-201ENST00000624875 2105 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC091953.4-201ENST00000625179 341 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC068733.1-202ENST00000531479 2456 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 AC016251.1-201ENST00000624299 4198 ntBASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.47□□□□□ -1.21
NPIPA3F8WFD2 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPIPA3F8WFD2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC096642.1-201ENST00000612055 2614 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RNA5SP256-201ENST00000390978 113 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL390039.1-201ENST00000399148 611 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms