Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC005262.1-201ENST00000588562 362 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL358335.3-201ENST00000604678 327 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC006213.5-201ENST00000619673 288 ntBASIC7.56□□□□□ -1.2
SNX18Q96RF0 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.56□□□□□ -1.2
SNX18Q96RF0 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNX18Q96RF0 MTCO1P46-201ENST00000451639 1491 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 HCG21-204ENST00000419481 605 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 FBP2P1-202ENST00000424473 530 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC244034.1-201ENST00000428027 792 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 PAICSP5-201ENST00000430406 1217 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC242426.2-201ENST00000446956 795 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 HNRNPA1P31-201ENST00000448627 970 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 RN7SL573P-201ENST00000485340 276 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 IGHV3-36-201ENST00000520848 401 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 RN7SL366P-201ENST00000577957 292 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC022884.1-201ENST00000578490 577 ntTSL 4 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AL022324.3-201ENST00000609330 747 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 MIR8075-201ENST00000614354 80 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 Z98043.1-201ENST00000624123 339 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AC131935.2-201ENST00000623649 1371 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.55□□□□□ -1.2
SNX18Q96RF0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNX18Q96RF0 AL390728.4-201ENST00000421406 1465 ntBASIC7.55□□□□□ -1.2
SNX18Q96RF0 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SNX18Q96RF0 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SNX18Q96RF0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms