Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 COX6A1P3-201ENST00000404167 293 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 RPL12P19-201ENST00000429825 486 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AL136454.1-201ENST00000443181 466 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 TXNP3-201ENST00000454560 301 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 RN7SL792P-201ENST00000496286 305 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC006499.1-201ENST00000511870 850 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 RN7SL785P-201ENST00000578437 253 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 BX649601.1-201ENST00000608264 572 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC005786.4-201ENST00000623369 682 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC073488.5-201ENST00000631993 754 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC087203.2-201ENST00000526502 1587 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC091152.4-201ENST00000623480 3483 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 ZNF887P-201ENST00000431363 1407 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 HIST1H2BPS2-201ENST00000402707 340 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC083906.4-201ENST00000514634 987 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 PIGFP1-201ENST00000519180 653 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC233290.2-201ENST00000552852 390 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 RPL23AP77-201ENST00000588044 463 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC016999.2-201ENST00000614692 556 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AL132821.1-201ENST00000616029 394 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC016582.1-202ENST00000636341 2982 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 AC020549.1-201ENST00000536916 1440 ntBASIC8.62□□□□□ -1.03
LMO3Q8TAP4 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
LMO3Q8TAP4 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 MAPK10-347ENST00000641762 2856 ntBASIC8.61□□□□□ -1.03
LMO3Q8TAP4 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
LMO3Q8TAP4 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms