Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AL356432.2-201ENST00000407841 422 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 BECN1P2-201ENST00000407947 812 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 TRBV21-1-201ENST00000453262 348 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 HAUS6P3-201ENST00000456660 1107 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 RN7SL856P-201ENST00000461754 298 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 RN7SL146P-201ENST00000472338 297 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AP006437.1-202ENST00000530327 933 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 SETP16-201ENST00000531054 711 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 OR7E15P-201ENST00000533484 967 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 SLC25A3P2-201ENST00000547720 880 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 SOD1P2-201ENST00000563903 451 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 RN7SL619P-201ENST00000581753 258 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 RN7SL664P-201ENST00000584239 305 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC060766.2-201ENST00000588235 334 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC087645.1-201ENST00000588528 291 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AL158206.1-201ENST00000563205 1965 ntBASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CD200-203ENST00000473539 1524 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC7.56□□□□□ -1.2
NPIPA3F8WFD2 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC136428.3-201ENST00000566387 1990 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC008817.1-201ENST00000504215 1562 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AL160191.3-201ENST00000619152 2203 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 FTH1P10-201ENST00000401830 930 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 RN7SKP139-201ENST00000410411 293 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 RPS27P12-201ENST00000464146 258 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC114400.1-201ENST00000487624 681 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 OR7E16P-201ENST00000592975 885 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 MIR6807-201ENST00000621968 92 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 CDY4P-201ENST00000418290 1513 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 AC006058.1-201ENST00000568686 5067 ntBASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPIPA3F8WFD2 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms