Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.74□□□□□ -1.01
MTHFRP42898 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 AC104046.1-201ENST00000559487 406 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 LINC02152-201ENST00000566208 1281 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 AC091304.5-201ENST00000568969 158 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.74□□□□□ -1.01
MTHFRP42898 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 RN7SL657P-201ENST00000582431 293 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.74□□□□□ -1.01
MTHFRP42898 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC8.74□□□□□ -1.01
MTHFRP42898 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC8.74□□□□□ -1.01
MTHFRP42898 AC007346.1-202ENST00000602826 684 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.74□□□□□ -1.01
MTHFRP42898 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 C18orf12-201ENST00000623329 537 ntBASIC8.74□□□□□ -1.01
MTHFRP42898 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.74□□□□□ -1.01
MTHFRP42898 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.74□□□□□ -1.01
MTHFRP42898 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
MTHFRP42898 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.74□□□□□ -1.01
MTHFRP42898 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
MTHFRP42898 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 MFSD8-243ENST00000641695 1455 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
MTHFRP42898 RNA5SP231-201ENST00000410496 138 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 RPL3P4-201ENST00000417615 423 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 ASS1P5-201ENST00000435496 1239 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.73□□□□□ -1.01
MTHFRP42898 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 CYP4F25P-201ENST00000446871 520 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC8.73□□□□□ -1.01
MTHFRP42898 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.73□□□□□ -1.01
MTHFRP42898 HAUS6P3-201ENST00000456660 1107 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC8.73□□□□□ -1.01
MTHFRP42898 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 AC026111.1-201ENST00000551090 1195 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AC079363.1-201ENST00000551366 1125 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AC090774.2-201ENST00000584708 322 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 AC084876.1-201ENST00000612793 641 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 MIR6731-201ENST00000614863 72 ntBASIC8.73□□□□□ -1.01
MTHFRP42898 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
MTHFRP42898 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.73□□□□□ -1.01
MTHFRP42898 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
MTHFRP42898 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
MTHFRP42898 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.72□□□□□ -1.01
MTHFRP42898 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
MTHFRP42898 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
MTHFRP42898 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
MTHFRP42898 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
MTHFRP42898 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
MTHFRP42898 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.72□□□□□ -1.01
MTHFRP42898 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
MTHFRP42898 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
MTHFRP42898 ATP5A1P3-201ENST00000573189 1507 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms