Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CLIC4Q9Y696 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLIC4Q9Y696 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 CYP21A1P-202ENST00000354927 1481 ntBASIC23.14■■□□□ 1.29
CLIC4Q9Y696 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CLIC4Q9Y696 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 CNN2P6-201ENST00000439038 900 ntBASIC23.13■■□□□ 1.29
CLIC4Q9Y696 AC007322.4-201ENST00000509611 723 ntBASIC23.13■■□□□ 1.29
CLIC4Q9Y696 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.13■■□□□ 1.29
CLIC4Q9Y696 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 KRT18P11-201ENST00000435214 1283 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 DUX4L16-201ENST00000555130 1264 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 AC087633.2-202ENST00000565166 1439 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 AL356652.1-201ENST00000615962 565 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 AC013268.1-206ENST00000638368 961 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 AC112229.1-201ENST00000639295 961 ntBASIC23.12■■□□□ 1.29
CLIC4Q9Y696 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.12■■□□□ 1.29
CLIC4Q9Y696 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLIC4Q9Y696 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 AC006015.1-201ENST00000429970 570 ntBASIC23.1■■□□□ 1.29
CLIC4Q9Y696 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLIC4Q9Y696 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms