Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC30.39■■■□□ 2.46
SHANK2Q9UPX8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
SHANK2Q9UPX8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
SHANK2Q9UPX8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.39■■■□□ 2.45
SHANK2Q9UPX8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 AC124283.5-201ENST00000624661 1809 ntBASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 MIR4785-201ENST00000585005 73 ntBASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHANK2Q9UPX8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.37■■■□□ 2.45
SHANK2Q9UPX8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 TK2-213ENST00000563369 882 ntTSL 5 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 AL445228.2-201ENST00000605589 952 ntBASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHANK2Q9UPX8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 PENK-204ENST00000518770 863 ntTSL 2 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
SHANK2Q9UPX8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 RCN1P1-201ENST00000400413 996 ntBASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SHANK2Q9UPX8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 PRKY-204ENST00000533551 1019 ntBASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SHANK2Q9UPX8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
SHANK2Q9UPX8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms