Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 HLA-B-256ENST00000639848 1089 ntBASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA1Q9UND3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA1Q9UND3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
NPIPA1Q9UND3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 AC116050.2-201ENST00000612102 1779 ntBASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 AC092368.3-202ENST00000574180 1591 ntBASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
NPIPA1Q9UND3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms