Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PPARGC1AQ9UBK2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
PPARGC1AQ9UBK2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
PPARGC1AQ9UBK2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PPARGC1AQ9UBK2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 KRT18P68-201ENST00000392293 1000 ntBASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 SLC29A4P1-201ENST00000398760 971 ntBASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPARGC1AQ9UBK2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 MIPEPP3-201ENST00000412105 444 ntBASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 HLA-L-209ENST00000420110 1011 ntBASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPARGC1AQ9UBK2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 AL355472.2-201ENST00000422958 438 ntBASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPARGC1AQ9UBK2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PPARGC1AQ9UBK2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 BX276092.2-201ENST00000417668 665 ntBASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 AC142086.2-201ENST00000569753 217 ntBASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PPARGC1AQ9UBK2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms