Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL20A1Q9P218 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.03■■□□□ 1.28
COL20A1Q9P218 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL20A1Q9P218 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.02■■□□□ 1.28
COL20A1Q9P218 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
COL20A1Q9P218 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.02■■□□□ 1.28
COL20A1Q9P218 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.02■■□□□ 1.28
COL20A1Q9P218 AP006294.2-201ENST00000641667 209 ntBASIC23.02■■□□□ 1.28
COL20A1Q9P218 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.02■■□□□ 1.28
COL20A1Q9P218 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL20A1Q9P218 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
COL20A1Q9P218 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 PTBP1P-201ENST00000554374 1601 ntBASIC23.01■■□□□ 1.27
COL20A1Q9P218 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 AL596275.1-201ENST00000423464 877 ntBASIC23.01■■□□□ 1.27
COL20A1Q9P218 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.01■■□□□ 1.27
COL20A1Q9P218 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.01■■□□□ 1.27
COL20A1Q9P218 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL20A1Q9P218 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23■■□□□ 1.27
COL20A1Q9P218 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23■■□□□ 1.27
COL20A1Q9P218 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
COL20A1Q9P218 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
COL20A1Q9P218 AL390719.1-204ENST00000412397 1219 ntBASIC23■■□□□ 1.27
COL20A1Q9P218 UBE2SP1-201ENST00000450587 669 ntBASIC23■■□□□ 1.27
COL20A1Q9P218 AC008550.1-201ENST00000511500 884 ntBASIC23■■□□□ 1.27
COL20A1Q9P218 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL20A1Q9P218 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL20A1Q9P218 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 FP700111.2-201ENST00000619190 1892 ntBASIC22.99■■□□□ 1.27
COL20A1Q9P218 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 RPS2P4-201ENST00000476944 856 ntBASIC22.99■■□□□ 1.27
COL20A1Q9P218 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 FAM197Y4-202ENST00000622692 608 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms