Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN4Q9NRR5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN4Q9NRR5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 AL355472.2-201ENST00000422958 438 ntBASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 AL121832.2-201ENST00000610979 668 ntBASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.64■□□□□ 0.57
UBQLN4Q9NRR5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 AC083906.2-201ENST00000511578 360 ntBASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN4Q9NRR5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN4Q9NRR5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 NCF1B-203ENST00000435988 1254 ntBASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN4Q9NRR5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 LSM12P1-201ENST00000411836 588 ntBASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms