Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SMCO4Q9NRQ5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 AC135050.7-201ENST00000624508 2218 ntBASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMCO4Q9NRQ5 PRORSD1P-202ENST00000563365 2154 ntBASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMCO4Q9NRQ5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 OR6D1P-202ENST00000641007 5290 ntBASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 FP700111.2-201ENST00000619190 1892 ntBASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SMCO4Q9NRQ5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 FP325331.1-202ENST00000623531 1380 ntBASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RP9P-202ENST00000450133 1212 ntBASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SMCO4Q9NRQ5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms