Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 KRT18P5-201ENST00000436075 1291 ntBASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA4BQ9NPR2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA4BQ9NPR2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA4BQ9NPR2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 TCF3P1-201ENST00000423021 1937 ntBASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 MYCNOS-205ENST00000641950 531 ntBASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SEMA4BQ9NPR2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEMA4BQ9NPR2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
SEMA4BQ9NPR2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SEMA4BQ9NPR2 KRT8P36-201ENST00000489121 1440 ntBASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 CDV3P1-201ENST00000471403 739 ntBASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 NTF6G-201ENST00000591094 616 ntBASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
SEMA4BQ9NPR2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4BQ9NPR2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms